DRSC/TRiP Functional Genomics Resources

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Protein Alignment muc and Dlat

DIOPT Version :9

Sequence 1:NP_001260196.1 Gene:muc / 34021 FlyBaseID:FBgn0283658 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_112287.1 Gene:Dlat / 81654 RGDID:619859 Length:632 Species:Rattus norvegicus


Alignment Length:631 Identity:269/631 - (42%)
Similarity:347/631 - (54%) Gaps:156/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RSNNATYVRRSTGNVVVRALSSQLINSRKLQSIRSKLNTSQSPVTWSYNFA-------------- 71
            |:..||.....||...||..|.  |.|..::|:          ..|||..|              
  Rat    19 RARWATLKGPRTGPAAVRCGSG--IPSYGVRSL----------CGWSYGSATVPRNRILQQLLGS 71

  Fly    72 ---RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGF 133
               |:| :||.|.:||||:|||||:.|:|..||||||:|::||||:.|:||||||:|||:.||.:
  Rat    72 PSRRSY-SLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECY 135

  Fly   134 LAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAA---APAAPAAAPAPAPAA--AAA 193
            :||||:..||:|||||.::||.|.....:.||.|:..|.|.|   |..|||||||.||||  |:|
  Rat   136 MAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDSATAATQAAPAPAAAPAAAPAAPSASA 200

  Fly   194 P---------------------------------------------------------------- 194
            |                                                                
  Rat   201 PGSSYPVHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKI 265

  Fly   195 ----------------------------------------PPPPPPAAAPAAAAPP------PAP 213
                                                    |..|||...|.||.||      |.|
  Rat   266 LVPEGTRDVPLGTPLCIIVEKQEDIAAFADYRPTEVTSLKPQAPPPVPPPVAAVPPIPQPLAPTP 330

  Fly   214 AAAPAAAGTGRVYASPMAKRLAEAQQLRL-QGKGSGVHGSIKSGDL---AGQKAAAKPAAAA--- 271
            :||||.. .|||:.||:||:||..:.:.| |.||:|..|.|...|:   ...|||...||||   
  Rat   331 SAAPAGP-KGRVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPTKAAPAAAAAAPPG 394

  Fly   272 PAKAPRAAGARYEDIPVTNMRAVIAKRLLESKTQLPHYYVTVQCQVDKLLKFRAKVNKKYEKQGA 336
            |..||..||. :.|||::|:|.|||:||::||..:||||::|...:.::|..|.::||..|.:| 
  Rat   395 PRVAPTPAGV-FIDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKG- 457

  Fly   337 RVSVNDFIIKAVAIASLKVPEANSAWMDTVIRKYDDVDVSVAVSTDKGLITPIVFNADRKGVLEI 401
            ::|||||||||.|:|.||||||||:|||||||:...|||||||||..||||||||||..||:..|
  Rat   458 KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETI 522

  Fly   402 SKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVINPPQSCILAIGTTTKQLVADPD 466
            :.||.:||:|||:.|||||||||||.::|||||||:..|:|:|||||:||||||.:..:|: ..|
  Rat   523 ASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLI-PAD 586

  Fly   467 SLKGFKEVNMLTVTLSADHRVVDGAVAARWLQHFRDYMEDPSNMVL 512
            :.|||...::::||||.|||||||||.|:||..|:.|:|.|..|:|
  Rat   587 NEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPVTMLL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mucNP_001260196.1 PDHac_trf_mito 83..512 CDD:273567 248/550 (45%)
lipoyl_domain 83..155 CDD:133458 46/71 (65%)
2-oxoacid_dh 299..512 CDD:278621 126/212 (59%)
DlatNP_112287.1 lipoyl_domain 83..156 CDD:133458 45/72 (63%)
lipoyl_domain 209..283 CDD:133458 0/73 (0%)
PDHac_trf_mito 211..632 CDD:273567 179/424 (42%)
E3_binding 342..375 CDD:280908 13/32 (41%)
2-oxoacid_dh 421..632 CDD:278621 126/212 (59%)
Catalytic. /evidence=ECO:0000250 456..632 113/177 (64%)
CoA-binding. /evidence=ECO:0000250 600..611 9/10 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349377
Domainoid 1 1.000 270 1.000 Domainoid score I1763
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6814
Inparanoid 1 1.050 434 1.000 Inparanoid score I1648
OMA 1 1.010 - - QHG62888
OrthoDB 1 1.010 - - D373186at33208
OrthoFinder 1 1.000 - - FOG0001572
OrthoInspector 1 1.000 - - oto96088
orthoMCL 1 0.900 - - OOG6_101258
Panther 1 1.100 - - LDO PTHR23151
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2175
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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