DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment muc and CG5599

DIOPT Version :9

Sequence 1:NP_001260196.1 Gene:muc / 34021 FlyBaseID:FBgn0283658 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_573000.1 Gene:CG5599 / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster


Alignment Length:512 Identity:132/512 - (25%)
Similarity:240/512 - (46%) Gaps:76/512 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ATYVRRSTGNV-VVRALSSQLINSRKLQSIRSKLNTSQSPVTWSYNFARAYANLPEHIRVPLPAL 88
            ||::.|:.... ::|...||....|:...:.|.|:.     |.|:|.    :::.|.||      
  Fly     2 ATHLLRNGATCWLLRNCISQRAALRRCLHVTSSLDK-----TVSFNL----SDIGEGIR------ 51

  Fly    89 SPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILIQGGTKDVPVGQLLC 153
                 ..::..|..||||.:.:.|.|||:::|||::...:..:|.:.||       ...:.::..
  Fly    52 -----EVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKITKI-------HHKIDEIAL 104

  Fly   154 IIVPDQGSVAAFANFKDDGAAAAPAAPAAAPAPAPAAAAAPPPPPPPAAAPAAAAPPPAPAAAPA 218
            :..|    :..|....:|......::.:::...:.::|:   ......:|.|:|.|.......| 
  Fly   105 VGKP----LLDFDVVNEDEDEPEDSSSSSSSTSSDSSAS---ENEEKQSAEASATPTEGRVIIP- 161

  Fly   219 AAGTGRVYASPMAKRLAEAQQLRL-QGKGSGVHGSIKSGDLAGQKAAAKPAAAAP-----AKAPR 277
                    |:|..:|||:..||.| :...:|.:|.:..||:........|....|     ||.|.
  Fly   162 --------ATPSVRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQVPPGTNVPHPTLLAKTPS 218

  Fly   278 AA--GARYEDIPVTNMRAV--IAKRLLESKTQ---LPHYYVTVQCQVDKLLKFRAKVNKKYEKQG 335
            ||  ||....:|...:..:  :.|.:|:|.|:   :||:..:.:..:.:|::||.::....::.|
  Fly   219 AAPSGAASVSVPADRVEVLKGVRKAMLKSMTESLKIPHFAYSDEIDMTQLMQFRNQLQLVAKENG 283

  Fly   336 A-RVSVNDFIIKAVAIASLKVPEANSAW---MDTVIRKYDDVDVSVAVSTDKGLITPIVFNADRK 396
            . :::...|.|||.:||..|.|..||:.   .::::.| ...::|||:.|.:||:.|.:.|...|
  Fly   284 VPKLTFMPFCIKAASIALSKYPIVNSSLDLASESLVFK-GAHNISVAIDTPQGLVVPNIKNCQTK 347

  Fly   397 GVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVINPPQSCILAIGTTTKQL 461
            .::||:||:.||..:.|...|.|.:|..||.|:||:|:.|.......|..||..|.|:|.|.   
  Fly   348 TIIEIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQVAIGAMGRTK--- 409

  Fly   462 VADP------DSLKGFKEVNMLTVTLSADHRVVDGAVAARWLQHFRDYMEDPSNMVL 512
             |.|      :.:|.:    :::|:.||||||:||...|.:...::.|:|:|:..:|
  Fly   410 -AVPRFNDKDEVVKAY----VMSVSWSADHRVIDGVTMASFSNVWKQYLENPALFLL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mucNP_001260196.1 PDHac_trf_mito 83..512 CDD:273567 116/451 (26%)
lipoyl_domain 83..155 CDD:133458 15/71 (21%)
2-oxoacid_dh 299..512 CDD:278621 69/225 (31%)
CG5599NP_573000.1 lipoyl_domain 39..109 CDD:133458 21/95 (22%)
PLN02528 41..462 CDD:215289 121/468 (26%)
E3_binding 161..194 CDD:280908 12/41 (29%)
2-oxoacid_dh 248..461 CDD:278621 67/221 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442153
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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