DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15818 and colec10

DIOPT Version :10

Sequence 1:NP_609116.1 Gene:CG15818 / 34019 FlyBaseID:FBgn0031910 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001276917.2 Gene:colec10 / 794040 ZFINID:ZDB-GENE-131127-525 Length:271 Species:Danio rerio


Alignment Length:316 Identity:58/316 - (18%)
Similarity:100/316 - (31%) Gaps:105/316 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STRIILCAFL-LLYPYGSLIEAQEGRRYVCLLSDPPNQCSEYCVSALQPVI--------DHLSKE 59
            |.|:.||.|| .:||:.|..|......:.....||..:.:|    ..:.::        ..|..|
Zfish     7 SRRLFLCLFLCYVYPHCSTNEVCSNNIHPGTKGDPGKEGAE----GEEGIMGKSGPSGKQGLPGE 67

  Fly    60 QQDWGACEVKLNGSVAKL-------DKIEDQLTATQIQIEAQQAFLVNNISKAIKTEDLE----- 112
            ..|.|     |.|.:.|.       ||             .||.           |:.::     
Zfish    68 YGDKG-----LLGQIGKRGPRGMRGDK-------------GQQG-----------TDGIQGLKGK 103

  Fly   113 -------QKLKDIEGNQTALSNQLKDGQKRTENQLTAIQKTLSDIERKLVLQRYQQIGSRYFYIE 170
                   .|.:.:.|...|..:::|:..|..:..:..|::|                 ...||: 
Zfish   104 PGSVCDCGKYRKVIGQMDASISKVKNAIKFIKKVVLGIRET-----------------ENMFYL- 150

  Fly   171 HNLQVNWRTAEQ---RCIEMGGHLAAFQNAEEYNAIVGQLNKANYWLGVNDLAKQGEFISLASGK 232
              |....||.:|   .|...||.||..:..|:.|.:...:.:|:    :|.:     ||.|.:|.
Zfish   151 --LVTEARTYQQSLLNCKLRGGTLAMSRTEEKNNLLANFIREAD----LNHV-----FIRLQAGV 204

  Fly   233 RATYFKWRKNEPKYNNPT----------QHCAYVFGHENIMIVLSCTTDVMHFICQ 278
            ....:.:....|..|...          ..|..: |....:..:.|.. ..::||:
Zfish   205 TEVGYMYLNGNPLLNTTAWAIQGADSGKGDCVQL-GRTGALSQVDCGA-TQYYICE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15818NP_609116.1 MscS_porin <75..>165 CDD:432790 13/108 (12%)
CLECT 164..278 CDD:153057 25/126 (20%)
colec10NP_001276917.2 None

Return to query results.
Submit another query.