DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15818 and Mbl2

DIOPT Version :10

Sequence 1:NP_609116.1 Gene:CG15818 / 34019 FlyBaseID:FBgn0031910 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_073195.2 Gene:Mbl2 / 64668 RGDID:67380 Length:244 Species:Rattus norvegicus


Alignment Length:149 Identity:38/149 - (25%)
Similarity:69/149 - (46%) Gaps:23/149 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QLTAIQKTLSDIERKLVLQRYQQIGSRYFYIE-HNLQVNWRTAEQRCIEMGGHLAAFQNAEEYNA 202
            ::.|::..|..:.:.::|...:.:|.:||... ..:.:|  .|:..|.|:.|.:|..:|||| |.
  Rat   107 EIAALRSELRAMRKWVLLSMSENVGKKYFMSSVRRMPLN--RAKALCSELQGTVATPRNAEE-NR 168

  Fly   203 IVGQLNKANYWLGVNDLAKQGEFISLASGKRATYFKWRKNEPKYNNPTQHCAYVFGHENIMIVLS 267
            .:..:.|...:||:.|...:..|..| :|.|..|..|.:.||  ||       |...||.:::|:
  Rat   169 AIQNVAKDVAFLGITDQRTENVFEDL-TGNRVRYTNWNEGEP--NN-------VGSGENCVVLLT 223

  Fly   268 --------CTTDVMHFICQ 278
                    | :|....:|:
  Rat   224 NGKWNDVPC-SDSFLVVCE 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15818NP_609116.1 MscS_porin <75..>165 CDD:432790 4/25 (16%)
CLECT 164..278 CDD:153057 33/122 (27%)
Mbl2NP_073195.2 Collagen 36..95 CDD:460189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..99
CLECT_collectin_like 132..242 CDD:153061 34/124 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.