DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15818 and Clec4d

DIOPT Version :9

Sequence 1:NP_609116.1 Gene:CG15818 / 34019 FlyBaseID:FBgn0031910 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001003707.1 Gene:Clec4d / 362432 RGDID:1303339 Length:218 Species:Rattus norvegicus


Alignment Length:84 Identity:23/84 - (27%)
Similarity:36/84 - (42%) Gaps:8/84 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 YFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEYNAIVGQL--NKANYWLGVN--DLAKQGEFI 226
            ||.:..|  ..|..:|:.|..|..||... |.|.....|.||  .:.:|:||::  .:..|.:::
  Rat    94 YFALNDN--QTWHESERNCSGMSSHLVTI-NTEAEQDFVTQLLDEQFSYFLGLSYEKVEGQWQWV 155

  Fly   227 SLASGKRATYFKWRKNEPK 245
            ..........| |:..|||
  Rat   156 DKTPFNPNVVF-WKVGEPK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15818NP_609116.1 CLECT 164..278 CDD:153057 23/84 (27%)
Clec4dNP_001003707.1 CLECT_DC-SIGN_like 82..206 CDD:153060 23/84 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X59
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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