DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15818 and Colec12

DIOPT Version :10

Sequence 1:NP_609116.1 Gene:CG15818 / 34019 FlyBaseID:FBgn0031910 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001020892.1 Gene:Colec12 / 361289 RGDID:735039 Length:742 Species:Rattus norvegicus


Alignment Length:124 Identity:29/124 - (23%)
Similarity:55/124 - (44%) Gaps:15/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 YFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEYNAIVGQ-LNKANYWLGVNDLAKQGEFISLA 229
            ||.:|..:   :..|:..|.:...||....:.||...|..| :.:.::|:|:.|..::.|:..| 
  Rat   620 YFSVEKEI---FEDAKLFCEDKSSHLVFINSREEQQWIKKQTMGRESHWIGLTDSEQESEWKWL- 680

  Fly   230 SGKRATYFKWRKNEP----KYNNPTQHCAYVF--GHENIMIVLSCTTDVMHFICQSDSD 282
            .|....|..|:..:|    ..:.|.:.||.:.  |..|   ...| .::.:|||:.:.:
  Rat   681 DGTPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWN---DFQC-DEINNFICEKERE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15818NP_609116.1 MscS_porin <75..>165 CDD:432790
CLECT 164..278 CDD:153057 28/118 (24%)
Colec12NP_001020892.1 PRK11281 85..>307 CDD:481316
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..608
Collagen 455..563 CDD:460189
CLECT_DC-SIGN_like 607..732 CDD:153060 29/119 (24%)
Blue background indicates that the domain is not in the aligned region.

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