DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15818 and Mbl1

DIOPT Version :10

Sequence 1:NP_609116.1 Gene:CG15818 / 34019 FlyBaseID:FBgn0031910 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_036731.2 Gene:Mbl1 / 24548 RGDID:3055 Length:238 Species:Rattus norvegicus


Alignment Length:151 Identity:37/151 - (24%)
Similarity:71/151 - (47%) Gaps:17/151 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 GNQTALSNQLKDGQKRTENQLTAIQKTLSDIERKL--------------VLQRYQQIGSRYFYIE 170
            |:..|..:|...|||.......||:..|:::|.::              .....::.|.::|...
  Rat    68 GSVGAPGSQGPKGQKGDRGDSRAIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 132

  Fly   171 HNLQVNWRTAEQRCIEMGGHLAAFQNAEEYNAIVGQLNKANYWLGVNDLAKQGEFISLASGKRAT 235
            |. ::.:...:..|.|:.|.:|..:|||| |..:.::.|.:.:||:.|...:|:|:.:..| |.|
  Rat   133 HE-RMPFSKVKALCSELRGTVAIPRNAEE-NKAIQEVAKTSAFLGITDEVTEGQFMYVTGG-RLT 194

  Fly   236 YFKWRKNEPKYNNPTQHCAYV 256
            |..|:|:||..:...:.|..:
  Rat   195 YSNWKKDEPNDHGSGEDCVTI 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15818NP_609116.1 MscS_porin <75..>165 CDD:432790 11/58 (19%)
CLECT 164..278 CDD:153057 26/93 (28%)
Mbl1NP_036731.2 Collagen <36..86 CDD:460189 6/17 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..87 6/18 (33%)
CLECT_collectin_like 126..236 CDD:153061 26/93 (28%)
Calcium-dependent carbohydrate binding. /evidence=ECO:0000269|PubMed:11850428, ECO:0000269|PubMed:1436090, ECO:0000269|PubMed:9033386 202..210 2/7 (29%)

Return to query results.
Submit another query.