DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5181 and nabp1b

DIOPT Version :10

Sequence 1:NP_609115.1 Gene:CG5181 / 34018 FlyBaseID:FBgn0031909 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001025423.1 Gene:nabp1b / 570609 ZFINID:ZDB-GENE-050913-74 Length:216 Species:Danio rerio


Alignment Length:191 Identity:79/191 - (41%)
Similarity:103/191 - (53%) Gaps:29/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKDIKPGLKNINVIFIVLEVGVATVTKENREVRNFKVGDPTACINVSIWDEPGKLIAPGDIVRLT 73
            |||:|.||||||::|||||.|..:.||:..|||:.||.|.|..|.:|:|||.|.||..|||:|||
Zfish    12 IKDLKAGLKNINLVFIVLETGRVSKTKDGHEVRSCKVADRTGSITISVWDEVGSLIQTGDIIRLT 76

  Fly    74 KGYASIWRHCLTLYSGKNGEVFKIGEYCMVFNESVNMSEPKRAEQQAVANPAATPAGLPAGGGAP 138
            :||||:::.|||||.|:.|::.||||:||:|:|:.|.|||.......:.....|.....|.|..|
Zfish    77 RGYASLFKGCLTLYIGRTGDLQKIGEFCMIFSETPNFSEPNPEVLAKINQINNTHVKTEAHGSNP 141

  Fly   139 GLPAKGGATGIPQPAVAAAPGAPATQSAVTTAPAAAPAIAPQT--TTKPGTR-GGRGGGGR 196
            .|                          |...|.|.|.:..|.  :...|:| |..|.|||
Zfish   142 SL--------------------------VNPVPPAVPTVNGQAVYSFSAGSREGSFGSGGR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5181NP_609115.1 SoSSB_OBF 20..97 CDD:239937 41/76 (54%)
nabp1bNP_001025423.1 Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold. 12..119 CDD:471953 62/106 (58%)

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