DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5160 and rerglb

DIOPT Version :9

Sequence 1:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001038581.1 Gene:rerglb / 566719 ZFINID:ZDB-GENE-040724-73 Length:203 Species:Danio rerio


Alignment Length:174 Identity:61/174 - (35%)
Similarity:97/174 - (55%) Gaps:10/174 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQIQFDILDATGQLQELDGV 87
            :|:.:||..|.||:|::|||:|:||||||..|...:|..:.::|..|:..::.|...|..|...:
Zfish     4 IKLALLGSEGAGKSAVLVRFLTKRFIGEYASNANSLYHKRLSIDGRQLNLEVFDPCSQSGESRCI 68

  Fly    88 SLESNIRWADAFILMYSITDKCSFDECSRLKFLINYNKRRRKLGSASKEYALDIPVILVGNKTDQ 152
             ||..:.|||.|:::|:|:|:.||.....:...|..::|....|        ::||.|||||.|.
Zfish    69 -LEEPVDWADGFVVVYTISDRTSFLNAKNILAQIKESRRETCKG--------EVPVCLVGNKQDL 124

  Fly   153 PGDRMVSLEEGQRRFRELSCSCFHEISVRESVDQVQNVFRDVFR 196
            ...|.||.|||:...:|..| .|.|:|..|:..::.|:|..:.|
Zfish   125 CHSRQVSEEEGRVLSQEYKC-LFQEVSAAENYLEISNLFTKLIR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 60/172 (35%)
RERG_RasL11_like 24..200 CDD:206713 61/173 (35%)
rerglbNP_001038581.1 RERG_RasL11_like 5..171 CDD:206713 61/173 (35%)
Ras 5..167 CDD:278499 60/171 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384728at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.