DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5160 and rasl11b

DIOPT Version :9

Sequence 1:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001015774.1 Gene:rasl11b / 548491 XenbaseID:XB-GENE-491056 Length:247 Species:Xenopus tropicalis


Alignment Length:199 Identity:70/199 - (35%)
Similarity:109/199 - (54%) Gaps:39/199 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GLHTN---------KQKTLKVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQ 69
            |.||.         ..:.:|:.|:|.|||||||:||||:|:||||:|:.|...:|:       .|
 Frog    16 GTHTECASSSAGTASSRVIKIAVVGGSGVGKTALVVRFLTKRFIGDYERNAGNLYS-------RQ 73

  Fly    70 IQFDILDATGQLQELDGV-----SLESN------IRWADAFILMYSITDKCSFDECSRLKFLINY 123
            :|.|.::...|:|:..||     :|:||      :|||||.::::||||..|||..|||      
 Frog    74 VQIDGMNLAIQVQDTPGVQINDQNLDSNEQLNKSLRWADAVVIVFSITDCKSFDLISRL------ 132

  Fly   124 NKRRRKLGSASKEYALDIPVILVGNKTDQPGDRMVSLEEGQRRFRELSCSCFHEISVRESVDQVQ 188
            ::..|:|...::     ||:::|.||.|....:.|..:.|.:....|.|: |:|:||.|:...|.
 Frog   133 HQHARQLHPDNR-----IPIVIVANKADLLHLKQVEPQHGLQLANMLGCT-FYEVSVSENYIDVY 191

  Fly   189 NVFR 192
            |.|:
 Frog   192 NAFQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 67/183 (37%)
RERG_RasL11_like 24..200 CDD:206713 67/180 (37%)
rasl11bNP_001015774.1 Small GTPase-like 29..247 67/186 (36%)
RERG_RasL11_like 35..203 CDD:206713 67/180 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..228
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384728at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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