DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5160 and Rap2l

DIOPT Version :10

Sequence 1:NP_609112.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_477402.1 Gene:Rap2l / 37850 FlyBaseID:FBgn0283666 Length:182 Species:Drosophila melanogaster


Alignment Length:176 Identity:59/176 - (33%)
Similarity:87/176 - (49%) Gaps:15/176 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KTLKVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQIQFDILDATGQLQELD 85
            :..||:|||..||||:|:.|:|::..||.:|||.:|..|..:..:|......:|||..|..|...
  Fly     2 REFKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFAS 66

  Fly    86 GVSLESNIRWADAFILMYSITDKCSFDECSRLKFLINYNKRRRKLGSASKEYALDIPVILVGNKT 150
            ...|  .|:....||:|||:|:..:|.:.|.:|.:|.     |..||.      ..|::||.||.
  Fly    67 MRDL--YIKNGHGFIVMYSLTNHQTFQDISSMKNVIT-----RVKGSQ------PAPILLVANKF 118

  Fly   151 DQPGDRMVSLEEGQRRFRELSCSCFHEISVRESVDQVQNVFRDVFR 196
            |....|.||..||....:...|. |.|.|.::.:: |..||..:.|
  Fly   119 DLDCQREVSTAEGNALAQLWDCP-FIEASAKDRIN-VNEVFATIVR 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_609112.1 RERG_RasL11_like 24..200 CDD:206713 59/173 (34%)
Rap2lNP_477402.1 Rap2 16..165 CDD:133376 51/162 (31%)

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