DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5160 and Rala

DIOPT Version :9

Sequence 1:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster


Alignment Length:199 Identity:66/199 - (33%)
Similarity:96/199 - (48%) Gaps:29/199 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQIQFDILDATGQLQELDGVS 88
            ||:::|..||||:|:.::|:...|:.:|:|.....|..:..||.|::|.||||..||   .|..:
  Fly    13 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQ---EDYAA 74

  Fly    89 LESN-IRWADAFILMYSITDKCSFDECSRLKFLINYNKRRRKLGSASKEYALDIPVILVGNKTDQ 152
            :..| .|..:.|:.::||||..||......        |.:.|...:.|   .||.:|||||.|.
  Fly    75 IRDNYFRSGEGFLCVFSITDDESFQATQEF--------REQILRVKNDE---SIPFLLVGNKCDL 128

  Fly   153 PGDRMVSLEEGQRRFRELSCSCFHEIS--VRESVDQVQNVFRDVFRFWRVFSKFPKLKRSTSDVA 215
            ...|.|.|.|.|.|.::.:.. :.|.|  .||:||:   ||.|:.|..|        .|.|.|..
  Fly   129 NDKRKVPLSECQLRAQQWAVP-YVETSAKTRENVDK---VFFDLMREIR--------SRKTEDSK 181

  Fly   216 NTDG 219
            .|.|
  Fly   182 ATSG 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 59/174 (34%)
RERG_RasL11_like 24..200 CDD:206713 60/178 (34%)
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 61/186 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452992
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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