DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5160 and Rit2

DIOPT Version :9

Sequence 1:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_033091.1 Gene:Rit2 / 19762 MGIID:108054 Length:217 Species:Mus musculus


Alignment Length:202 Identity:69/202 - (34%)
Similarity:105/202 - (51%) Gaps:16/202 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GLHTNKQKTLKVMVLGQSGVGKTAMVVRFITRRFIGEYDPNLEKIYTCQTTLDKEQIQFDILDAT 78
            |..:...:..||::||..||||:|:.::||:.:|...:||.:|..|..|..:|.|....||||..
Mouse    12 GSSSGGSREYKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTA 76

  Fly    79 GQLQELDGVSLESNIRWADAFILMYSITDKCSFDECSRLKFLINYNKRRRKLGSASKEYALDIPV 143
            ||.:..  ...|..:|..:.||:.||:||:.||.|.::.|.|| :..|          :..:||:
Mouse    77 GQAEFT--AMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELI-FQVR----------HTYEIPL 128

  Fly   144 ILVGNKTDQPGDRMVSLEEGQRRFRELSCSCFH-EISVRESVDQV-QNVFRDVFRFWRVFSKFP- 205
            :|||||.|....|.||.|||....|:.:|:.|. ..::|..:|.. |.:.|::.|...:.|... 
Mouse   129 VLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAFQGLVREIRRKESMLSLVER 193

  Fly   206 KLKRSTS 212
            ||||..|
Mouse   194 KLKRKDS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 61/176 (35%)
RERG_RasL11_like 24..200 CDD:206713 62/177 (35%)
Rit2NP_033091.1 Rit_Rin_Ric 19..190 CDD:206712 62/183 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D563049at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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