DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5160 and rerg

DIOPT Version :9

Sequence 1:NP_001188708.1 Gene:CG5160 / 34015 FlyBaseID:FBgn0031906 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_031753456.1 Gene:rerg / 100134997 XenbaseID:XB-GENE-489597 Length:228 Species:Xenopus tropicalis


Alignment Length:207 Identity:70/207 - (33%)
Similarity:104/207 - (50%) Gaps:44/207 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KQKTLKVMVLGQSGVGKT-----------------------------AMVVRFITRRFIGEYDPN 54
            |...:|:.:||::||||:                             ::||||:|:|||.||||.
 Frog     3 KTAEVKIAILGRAGVGKSGSYLLLGHEWVIKKTAVKCTAHLHHQASLSLVVRFLTKRFIWEYDPT 67

  Fly    55 LEKIYTCQTTLDKEQIQFDILDATGQLQELDGVSLESNIRWADAFILMYSITDKCSFDECSRLKF 119
            ||..|..|.|:|.:.:..::||..||   .|.:..|.::||||.|.::|.||||.||||....|.
 Frog    68 LESTYRHQATIDDDLVTMELLDTAGQ---EDTIQREGHVRWADGFAIVYDITDKGSFDEVLPFKN 129

  Fly   120 LINYNKRRRKLGSASKEYALDIPVILVGNKTDQPGDRMVSLEEGQRRFRELSCSCFHEISVRESV 184
            |::..|:.:           ::..||||||.|....|.||.|||::...||:|: |:|.|.....
 Frog   130 LLDEIKKPK-----------NVTFILVGNKADLDHCRQVSTEEGEKLATELACA-FYECSACTGE 182

  Fly   185 DQVQNVFRDVFR 196
            ..:...|.::.|
 Frog   183 GNISEAFYELCR 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5160NP_001188708.1 small_GTPase 21..196 CDD:197466 68/203 (33%)
RERG_RasL11_like 24..200 CDD:206713 69/202 (34%)
rergXP_031753456.1 RERG_RasL11_like 8..198 CDD:206713 69/202 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384728at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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