DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and PKP4

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001364147.1 Gene:PKP4 / 8502 HGNCID:9026 Length:1192 Species:Homo sapiens


Alignment Length:573 Identity:126/573 - (21%)
Similarity:201/573 - (35%) Gaps:178/573 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 PRDQLSPDDLESLDMTRAGARALFTLADSKHN-MEQMRKSGIVPLMAQLLKSCHIDVVI------ 268
            ||    ||.|..|..:.|          |:|: :.|..:|.:.|       ..||..:.      
Human   378 PR----PDSLTGLRSSYA----------SQHSQLGQDLRSAVSP-------DLHITPIYEGRTYY 421

  Fly   269 ------PIMGTVRKCSSEPKFQLAITTEGMIPDIVSHL---SSENTELKME------GSTAIY-- 316
                  |..|||....|    |.|:...|.:.  :.:|   ||:.:.|..:      .:||.|  
Human   422 SPVYRSPNHGTVELQGS----QTALYRTGSVG--IGNLQRTSSQRSTLTYQRNNYALNTTATYAE 480

  Fly   317 ----------KC----------AFDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLR------- 354
                      :|          |.|||||....::...:|.....:|..:.|...:|:       
Human   481 PYRPIQYRVQECNYNRLQHAVPADDGTTRSPSIDSIQKDPREFAWRDPELPEVIHMLQHQFPSVQ 545

  Fly   355 -GATGAIWMCAVTDANVKV-LDQLRTVNHLVALLNDECDEVLTNVTGAISECVRFQS---NREQL 414
             .|...:......|..||: :.:|..:.|||.||:....||..|..||:...|..:|   |:..:
Human   546 ANAAAYLQHLCFGDNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDENKIAM 610

  Fly   415 RQAGGLPAMVSLLNSSHAPLLENLAKG----LKECAEDPDSMRILEDL----------------- 458
            :..||:||::.||..|....:..|..|    |..|  |...|.|:.|.                 
Human   611 KNVGGIPALLRLLRKSIDAEVRELVTGVLWNLSSC--DAVKMTIIRDALSTLTNTVIVPHSGWNN 673

  Fly   459 ------DAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLKSKDIM 517
                  ..::...||:...||           .|:||.:.:.|..|..:.:.|   ||:.|    
Human   674 SSFDDDHKIKFQTSLVLRNTT-----------GCLRNLSSAGEEARKQMRSCE---GLVDS---- 720

  Fly   518 VLSAVCAAIATIAQDQ----------TNLAILTDLKV----IYKLADLVQTTDDLLRMNLAAAVA 568
            :|..:...:.|...|.          .||:...:|:|    :..|.:|    ||||.....:..:
Human   721 LLYVIHTCVNTSDYDSKTVENCVCTLRNLSYRLELEVPQARLLGLNEL----DDLLGKESPSKDS 781

  Fly   569 ACACFGNNTEELGRLRTVTPIVTYMTSDNPLVHRSTAMALEKLSMDPQNC-ITMHQSGVVPFLLE 632
            ..:|:|...::..|    ||.........|         :..||..|:.. :..|.|.|.|:|..
Human   782 EPSCWGKKKKKKKR----TPQEDQWDGVGP---------IPGLSKSPKGVEMLWHPSVVKPYLTL 833

  Fly   633 CIGSTNKELQLAAAGCLRNIR----------ELALRAEE------YLLKIDDD 669
            ...|:|......:||.|:|:.          ..|:|.|:      .||::|:|
Human   834 LAESSNPATLEGSAGSLQNLSAGNWKFAAYIRAAVRKEKGLPILVELLRMDND 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788
armadillo repeat 144..180 CDD:293788
Arm_3 214..557 CDD:330530 93/439 (21%)
armadillo repeat 245..275 CDD:293788 8/41 (20%)
armadillo repeat 286..318 CDD:293788 9/52 (17%)
armadillo repeat 328..362 CDD:293788 5/41 (12%)
armadillo repeat 411..447 CDD:293788 11/39 (28%)
armadillo repeat 453..484 CDD:293788 6/53 (11%)
armadillo repeat 494..526 CDD:293788 7/31 (23%)
ARM 614..652 CDD:214547 11/38 (29%)
armadillo repeat 619..652 CDD:293788 10/32 (31%)
PKP4NP_001364147.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..262
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..310
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..348
ARM 1 415..455 9/45 (20%)
ARM 2 518..557 5/38 (13%)
ARM 3 560..599 13/38 (34%)
ARM 4 604..644 11/39 (28%)
ARM 5 660..702 7/52 (13%)
ARM 6 706..751 10/51 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 773..810 6/49 (12%)
ARM 7 815..855 12/39 (31%)
ARM 8 862..901 7/25 (28%)
ARM 9 950..993
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1058..1086
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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