DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT1G71020

DIOPT Version :10

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_177258.3 Gene:AT1G71020 / 843442 AraportID:AT1G71020 Length:628 Species:Arabidopsis thaliana


Alignment Length:533 Identity:107/533 - (20%)
Similarity:184/533 - (34%) Gaps:143/533 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSHNRSRKKKEQCGSCPNRFSKDKRQVA---AEDSDTTEVESSTDEEERWKEVARAAEIPADY-- 67
            |.|:.|.:||.:   .|..:......:|   ::|.|...:|.:..|.....:.:....||.|:  
plant   188 TVHSLSDEKKFE---SPPPWKSSSVSLAFFLSKDGDDERLEKAVTENSDDSQKSDNLTIPEDFLC 249

  Fly    68 ------------------YNIQKLVKYIKAGNQTATIVSLCCLK------------DYDLSTQIN 102
                              |....:.::|..||       |.|.|            :|.|.:.|:
plant   250 PISLELMKDPAIVSTGQTYERSFIQRWIDCGN-------LSCPKTQQKLENFTLTPNYVLRSLIS 307

  Fly   103 QFA----ISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNS- 162
            |:.    |...||   .:|    ..||...|:.:.||.            |:..|..:|..|:| 
plant   308 QWCTKHNIEQPGG---YMN----GRTKNSDGSFRDLSG------------DMSAIRALVCKLSSQ 353

  Fly   163 SMKDLKTMAAETLANVCKVRLARKYVRTCGGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTR 227
            |::|.:|..:|..:...:....|..:...|.||.||.|:             .|..|.|:.:   
plant   354 SIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLL-------------TSDGDTETQE--- 402

  Fly   228 AGARALFTLADSKHNMEQMRKSGIVPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEGM 292
            .....:..|:..:||.|.:..:|.|..:..:|::..::.......|:...|...:.::.|...|.
plant   403 NAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGA 467

  Fly   293 IPDIVSHLSSENTELKMEGSTAIYK-CAFDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLRGA 356
            |..:|..|...:...|.:.:||::. |.:.|.....|| ||.::|||.::.|.:...        
plant   468 IMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVR-AGIVKPLVKMLTDSSSER-------- 523

  Fly   357 TGAIWMCAVTDANVKVLDQLRTVNHLVALLNDECDEVLTNVTGAISECVRFQSNREQLRQAGGLP 421
                                            ..||.||    .:|.....|..:..:.:|..:|
plant   524 --------------------------------MADEALT----ILSVLASNQVAKTAILRANAIP 552

  Fly   422 AMVSLLNSSHAPLLENLAKGLK-ECAEDPDSMRILEDLDAVRLIWSLLKNPTTRVQAHAAYAICP 485
            .::..|........||.|..|. .|..|.:.:..:..|.||..:..|.::.|.|.:         
plant   553 PLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAK--------- 608

  Fly   486 CVRNANDSAELVR 498
              |.||...||:|
plant   609 --RKANSLLELLR 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 7/32 (22%)
armadillo repeat 144..180 CDD:293788 9/36 (25%)
VRR_NUC <172..232 CDD:451466 11/59 (19%)
SRP1 214..557 CDD:227396 57/287 (20%)
armadillo repeat 245..275 CDD:293788 4/29 (14%)
armadillo repeat 286..318 CDD:293788 8/32 (25%)
armadillo repeat 328..362 CDD:293788 8/33 (24%)
armadillo repeat 411..447 CDD:293788 8/36 (22%)
armadillo repeat 453..484 CDD:293788 6/30 (20%)
armadillo repeat 494..526 CDD:293788 3/5 (60%)
Arm 614..652 CDD:425727
armadillo repeat 619..652 CDD:293788
AT1G71020NP_177258.3 RING-Ubox_PUB 244..296 CDD:438326 9/58 (16%)
PLN03200 <342..>599 CDD:215629 63/317 (20%)
armadillo repeat 343..368 CDD:293788 8/24 (33%)
armadillo repeat 385..411 CDD:293788 8/41 (20%)
armadillo repeat 418..454 CDD:293788 5/35 (14%)
armadillo repeat 459..493 CDD:293788 8/33 (24%)
armadillo repeat 502..537 CDD:293788 13/79 (16%)
armadillo repeat 543..576 CDD:293788 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.

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