DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT1G24330

DIOPT Version :10

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_173843.2 Gene:AT1G24330 / 839049 AraportID:AT1G24330 Length:771 Species:Arabidopsis thaliana


Alignment Length:544 Identity:107/544 - (19%)
Similarity:181/544 - (33%) Gaps:161/544 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 VRLARKYVRTCGGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQ 245
            :.|.|||.:....  :::|..|...|...:|..| .|::    |...|..|.|.......:....
plant   208 LHLMRKYSKLFRS--EMMDENDSPCSTPCSPTGQ-GPNE----DRVNAFGRQLSKFGSINYKPMN 265

  Fly   246 MRKSGIVPLMAQLLKSCHI------DVVIPIMGTV--RKC---------SSEPKFQ-----LAIT 288
            .||||.:|:..:.|: |.|      |.||...|..  |.|         :|.||.|     |::|
plant   266 SRKSGQMPIPPEELR-CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLT 329

  Fly   289 TEGMIPDIVSHLSSEN----------------TELKMEGSTAIYKCAFDG----TTRDLVREAGG 333
            ....:..:::....:|                ..|.|..|.:....:.|.    |.:|:  ....
plant   330 PNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDI--RVVP 392

  Fly   334 LEPLVTIIKDKNVRE--NKP--------LLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALLND 388
            ||...||..::..:|  |.|        :|.|....:   |:.|....:..:.:.|.::..||.|
plant   393 LEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDIL---AIVDKEEDLAKKCKVVENVRILLKD 454

  Fly   389 -ECDEVLTNVTGAISECVRF-----QSNREQLRQAGGLPAMVSL-----------LNSSHAPLLE 436
             |...:|....|.:...::|     ..|....::.|.: |:.:|           |.|...||||
plant   455 NEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAM-ALFNLAVNNNRNKELMLTSGVIPLLE 518

  Fly   437 NLAKGLKECAEDPDSMRILEDLDAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSLV 501
            .:.    .|::.                    :.|.|     |.|....|:..|       :.::
plant   519 KMI----SCSQS--------------------QGPAT-----ALYLNLSCLEKA-------KPVI 547

  Fly   502 GAMELVVGLLKSKDIMVLSAVCAAIATIAQDQTNLAILTDLKVIYKLADLVQTTDDLLRMNLAAA 566
            |:.:               ||...:..:.||......|..|..:|.|:........||..|:..:
plant   548 GSSQ---------------AVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKS 597

  Fly   567 VAACACFGNN-------------------TEEL----GRLRTVTPIVTYMTSDNPLVHRSTAMAL 608
            :...|..||:                   .||:    |.:.|   :.|.:.:.:.:........|
plant   598 LQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMIST---LATVLDTGDTVEQEQAVSCL 659

  Fly   609 EKLSMDPQNCITM-HQSGVVPFLL 631
            ..|....::||.| .|.||:|.|:
plant   660 VILCTGSESCIQMVLQEGVIPSLV 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788
armadillo repeat 144..180 CDD:293788
VRR_NUC <172..232 CDD:451466 12/50 (24%)
SRP1 214..557 CDD:227396 78/411 (19%)
armadillo repeat 245..275 CDD:293788 12/37 (32%)
armadillo repeat 286..318 CDD:293788 5/47 (11%)
armadillo repeat 328..362 CDD:293788 9/43 (21%)
armadillo repeat 411..447 CDD:293788 10/46 (22%)
armadillo repeat 453..484 CDD:293788 4/30 (13%)
armadillo repeat 494..526 CDD:293788 3/31 (10%)
Arm 614..652 CDD:425727 8/19 (42%)
armadillo repeat 619..652 CDD:293788 7/14 (50%)
AT1G24330NP_173843.2 RING-Ubox_PUB 276..328 CDD:438326 14/52 (27%)
armadillo repeat 628..664 CDD:293788 7/38 (18%)
PLN03200 <631..>701 CDD:215629 13/56 (23%)
Blue background indicates that the domain is not in the aligned region.

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