DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT5G58680

DIOPT Version :10

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_200676.1 Gene:AT5G58680 / 835982 AraportID:AT5G58680 Length:357 Species:Arabidopsis thaliana


Alignment Length:346 Identity:75/346 - (21%)
Similarity:131/346 - (37%) Gaps:82/346 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSHNRSRKKKEQCGSCPNRFSKDKRQVAAEDSD------TTEVESSTDEEERWKEVARAAEI--- 63
            ||.:|.||....|              |.::||      .|.:|||:..||: |:.|....:   
plant    41 TSESRQRKLFLSC--------------AVDNSDDVIRNLITHLESSSSIEEQ-KQAAMEIRLLSK 90

  Fly    64 --PADYYNIQKLVKYIKAGNQTATIVSLCCLKDYDLSTQINQFAISDIGGLDVLVNILECSDTKC 126
              |      :..:|..||| ....:|||....|    .|:.::      |:..::|:..|.:.| 
plant    91 NKP------ENRIKLAKAG-AIKPLVSLISSSD----LQLQEY------GVTAVLNLSLCDENK- 137

  Fly   127 CLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSSMKDLKTMAAETLANVCKVRLARKYVRTC 191
                              :.||....:..:|:.|.......|..||..|..:.:|...:..:...
plant   138 ------------------EMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRS 184

  Fly   192 GGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQMRKSGIVPLMA 256
            |.||.||:|::  ....:..:|               .:.||::|..:..|..:..:|||:..:.
plant   185 GAIPLLVNLLE--NGGFRAKKD---------------ASTALYSLCSTNENKTRAVESGIMKPLV 232

  Fly   257 QLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEGMIPDIVSHLSSENTELKMEGSTAI--YKCA 319
            :|:.....|:|......:....|.|:.:.|:..||.:|.:| .:....|:.:.|.|.:|  ..|.
plant   233 ELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLV-EIVEAGTQRQKEISVSILLQLCE 296

  Fly   320 FDGTTRDLVREAGGLEPLVTI 340
            .....|.:|...|.:.|||.:
plant   297 ESVVYRTMVAREGAVPPLVAL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 4/28 (14%)
armadillo repeat 144..180 CDD:293788 8/35 (23%)
VRR_NUC <172..232 CDD:451466 10/59 (17%)
SRP1 214..557 CDD:227396 28/129 (22%)
armadillo repeat 245..275 CDD:293788 6/29 (21%)
armadillo repeat 286..318 CDD:293788 9/33 (27%)
armadillo repeat 328..362 CDD:293788 5/13 (38%)
armadillo repeat 411..447 CDD:293788
armadillo repeat 453..484 CDD:293788
armadillo repeat 494..526 CDD:293788
Arm 614..652 CDD:425727
armadillo repeat 619..652 CDD:293788
AT5G58680NP_200676.1 PLN03200 50..>338 CDD:215629 70/337 (21%)
armadillo repeat 105..130 CDD:293788 6/34 (18%)
armadillo repeat 137..173 CDD:293788 9/54 (17%)
armadillo repeat 178..209 CDD:293788 7/47 (15%)
armadillo repeat 260..296 CDD:293788 9/36 (25%)
Blue background indicates that the domain is not in the aligned region.

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