DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT5G18330

DIOPT Version :10

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_197334.1 Gene:AT5G18330 / 831951 AraportID:AT5G18330 Length:445 Species:Arabidopsis thaliana


Alignment Length:450 Identity:98/450 - (21%)
Similarity:174/450 - (38%) Gaps:100/450 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SDTTEVESSTDEEERWKEVARAAEIPADYYN--------------IQKLVKYIKAGNQTATIVSL 89
            :|:| .:.||:.:..|:|:.:.  :|..:|:              |...::.|::.|..:.|..:
plant     2 ADST-ADESTNADTLWRELHKV--LPEIWYDGGGKDHCEIDEAIRILTCLRKIESKNPESDISPV 63

  Fly    90 CCLKDYDLSTQINQFAISDI---GG--------LDVLVNILECSDTKCCLG---------ALKVL 134
            ...|:: :.|..|:..|..:   .|        |:.|.:...|..||..|.         ..:|:
plant    64 EVPKEF-ICTLSNKIMIEPMLIASGQTFEKSYILEWLKHERTCPRTKQVLYHRFMIPNHLINEVI 127

  Fly   135 SDITL--NIDIRKT---IVDL---DGIPLIVDILNSSMKDLKTMAAETLANVCKVRLARKYVRTC 191
            .:..|  |.|..||   ::||   |...|:..|.:.|..:.:|.||:.||     ..|:::...|
plant   128 KEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELA-----LKAKRFSSVC 187

  Fly   192 -GGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQMRKSGIV-PL 254
             ..:.|:.|.|...|:.|....|. :|:.||::      ..||...:.|:.|...:.::.:| ||
plant   188 VYFVAKIPDSITRLLTPLSISEDS-NPEFLENI------VTALHIFSTSEKNKTLVAENPLVLPL 245

  Fly   255 MAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEGMIPDIVSHLSSENTELKMEGSTAIYKCA 319
            :|:.:|...:...|....||...|.....::.|....::..:: |:..|...|            
plant   246 LAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALI-HVIEEGDSL------------ 297

  Fly   320 FDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVA 384
               .|.:.......|.| |..|.:|.|.|.  |:|.|...|    ...:||.:|..|..   .|:
plant   298 ---ATSEAFSALSNLCP-VKEISEKAVSEG--LIRAAIKKI----KAGSNVSMLLSLLA---FVS 349

  Fly   385 LLNDECDEVLTNVTGAISECVRFQSNREQLRQAGGLPAMVSLLNSSHA-PLLENLAKGLK 443
            ..|.:..|.:.|: |.|.:......|..            ||:|..:| .::.|:.|..|
plant   350 TQNHQTTEEMDNL-GLIYDLFSILRNSN------------SLVNDENAVVIVYNICKSYK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 8/48 (17%)
armadillo repeat 144..180 CDD:293788 13/41 (32%)
VRR_NUC <172..232 CDD:451466 14/60 (23%)
SRP1 214..557 CDD:227396 49/231 (21%)
armadillo repeat 245..275 CDD:293788 7/30 (23%)
armadillo repeat 286..318 CDD:293788 4/31 (13%)
armadillo repeat 328..362 CDD:293788 11/33 (33%)
armadillo repeat 411..447 CDD:293788 6/33 (18%)
armadillo repeat 453..484 CDD:293788
armadillo repeat 494..526 CDD:293788
Arm 614..652 CDD:425727
armadillo repeat 619..652 CDD:293788
AT5G18330NP_197334.1 RING-Ubox_PUB 66..117 CDD:438326 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.

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