DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT4G12710

DIOPT Version :10

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_193007.1 Gene:AT4G12710 / 826883 AraportID:AT4G12710 Length:402 Species:Arabidopsis thaliana


Alignment Length:452 Identity:98/452 - (21%)
Similarity:171/452 - (37%) Gaps:85/452 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NQFAISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSSMKD 166
            ||...|..|...|..||.|..:.:         .:.|.|  ..||..:|..:.|...:|:..: |
plant     8 NQMMASIAGDSTVTANISEEDEAE---------EETTTN--TWKTTKELLILHLSKKLLHGDL-D 60

  Fly   167 LKTMAAETLANVCK----VRLARKYVRTCGGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTR 227
            .:..||:.:..:.:    ...||..:...|.||.||.::                 ...::|...
plant    61 FRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPML-----------------FSSNVDARH 108

  Fly   228 AGARALFTLA-DSKHNMEQMRKSGIVPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEG 291
            |...||..|| .::.|..::.|:|.||.:.|:||..:..:.......:...|:.|..:..|.:.|
plant   109 ASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSG 173

  Fly   292 MIPDIVSHLSSENTELKMEGSTAIYKCAFDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLRGA 356
            :.|.::..|||...:.|::..||::..:........:.:|..:.||:.::|:  .:::......|
plant   174 VPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKE--CKKHSKFAEKA 236

  Fly   357 TGAIWMC---------AVTDANVKVLDQLRTVNHLVALLNDECDEVLTNVTGAISECVRFQSNRE 412
            |..:.|.         |:|.....:|..:.||       .|.....:.:..||:....|  |:|:
plant   237 TALVEMILSHSEDGRNAITSCEDGILTLVETV-------EDGSPLSIEHAVGALLSLCR--SDRD 292

  Fly   413 QLR----QAGGLPAMVSLLNSSHAPLLENLAKGLKECAEDPDSMRILEDLDAVRLIWSLLKNP-- 471
            :.|    :.|.:|.           ||.:...|   .::..|..|:|.||        |.:.|  
plant   293 KYRKLILKEGAIPG-----------LLSSTVDG---TSKSRDRARVLLDL--------LRETPRE 335

  Fly   472 ---TTRVQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLKSKDIMVLSAVCAAIATIA 530
               |........|.|...|..|..:||..:.|:..|......|..|.|...:|.||:|..|:
plant   336 KEMTPLTLEKIVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQHKAASCASIPDIS 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 6/28 (21%)
armadillo repeat 144..180 CDD:293788 8/35 (23%)
VRR_NUC <172..232 CDD:451466 10/63 (16%)
SRP1 214..557 CDD:227396 73/336 (22%)
armadillo repeat 245..275 CDD:293788 7/29 (24%)
armadillo repeat 286..318 CDD:293788 9/31 (29%)
armadillo repeat 328..362 CDD:293788 6/33 (18%)
armadillo repeat 411..447 CDD:293788 7/39 (18%)
armadillo repeat 453..484 CDD:293788 8/35 (23%)
armadillo repeat 494..526 CDD:293788 10/31 (32%)
Arm 614..652 CDD:425727
armadillo repeat 619..652 CDD:293788
AT4G12710NP_193007.1 SRP1 92..>252 CDD:227396 36/178 (20%)
armadillo repeat 92..117 CDD:293788 8/41 (20%)
armadillo repeat 128..159 CDD:293788 7/30 (23%)
armadillo repeat 166..201 CDD:293788 9/34 (26%)
Blue background indicates that the domain is not in the aligned region.

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