DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and AT3G20170

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_188652.1 Gene:AT3G20170 / 821561 AraportID:AT3G20170 Length:475 Species:Arabidopsis thaliana


Alignment Length:359 Identity:73/359 - (20%)
Similarity:151/359 - (42%) Gaps:46/359 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 ISDIGGLDVLV---NILECSDTKCCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSSMKDL 167
            ::.:|||::::   |..|...::..|  |::||.:|...:.|:.:|...|:..:|:.........
plant   147 LARLGGLEIVIRELNNWEDDGSRWYL--LEILSALTTIRESRRVLVHSGGLKFLVEAAKVGNLAS 209

  Fly   168 KTMAAETLANVCKVRLARKYVRTCGGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTRAGARA 232
            :..|...:..:...|.||:.:...|.||.||||.          ||   .||...|    ....|
plant   210 RERACHAIGLIGVTRRARRILVEAGVIPALVDLY----------RD---GDDKAKL----LAGNA 257

  Fly   233 LFTLADSKHNMEQMRKSGIVPLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEG----MI 293
            |..::.....:..:.::|.:||..:||..         ...:.|..:|..|.:....||    :.
plant   258 LGIISAQTEYIRPVTEAGSIPLYVELLSG---------QDPMGKDIAEDVFCILAVAEGNAVLIA 313

  Fly   294 PDIVSHLSSENTELKMEGSTAIYKCAFDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLRGATG 358
            ..:|..|.:.:.|.|:..|..::..|....:..::|.:|.:..|:.:::|.::...:.:    :|
plant   314 EQLVRILRAGDNEAKLAASDVLWDLAGYRHSVSVIRGSGAIPLLIELLRDGSLEFRERI----SG 374

  Fly   359 AIWMCAVTDANVKVLDQLRTVNHLVALLNDECDEVLTNVTGAISECVRFQSNREQLRQAGGLPAM 423
            ||...:..:.:.:.......:..|:..|.||.:|:..|...|:......|.:..::|:|.|.|..
plant   375 AISQLSYNENDREAFSDSGMIPILIEWLGDESEELRDNAAEALINFSEDQEHYARVREAIGHPVF 439

  Fly   424 VSL------LNSSHAPLLENLAK-GLKECAEDPD 450
            .|:      :.:||..::.::.: .::..|.|.|
plant   440 QSMQSRLARIRASHELMVRSMRRVTIQHLAHDHD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 7/30 (23%)
armadillo repeat 144..180 CDD:293788 5/35 (14%)
Arm_3 214..557 CDD:330530 46/248 (19%)
armadillo repeat 245..275 CDD:293788 5/29 (17%)
armadillo repeat 286..318 CDD:293788 7/35 (20%)
armadillo repeat 328..362 CDD:293788 7/33 (21%)
armadillo repeat 411..447 CDD:293788 7/42 (17%)
armadillo repeat 453..484 CDD:293788
armadillo repeat 494..526 CDD:293788
ARM 614..652 CDD:214547
armadillo repeat 619..652 CDD:293788
AT3G20170NP_188652.1 HEAT repeat 60..87 CDD:293787
HEAT repeat 111..145 CDD:293787
HEAT repeat 155..182 CDD:293787 7/28 (25%)
armadillo repeat 195..220 CDD:293788 2/24 (8%)
armadillo repeat 229..261 CDD:293788 14/48 (29%)
PLN03200 <233..>425 CDD:215629 44/221 (20%)
armadillo repeat 345..381 CDD:293788 7/39 (18%)
armadillo repeat 386..419 CDD:293788 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2584
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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