DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and ctnnd2b

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001352544.1 Gene:ctnnd2b / 558069 ZFINID:ZDB-GENE-070912-532 Length:1229 Species:Danio rerio


Alignment Length:496 Identity:104/496 - (20%)
Similarity:186/496 - (37%) Gaps:156/496 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 IPLIVDILNSSMKDLKTMAAETLANVC----KVRLARKYVRTCGGIPKLVDLIDIKLSILKTPRD 213
            :|.::.:|......:::.||..|.::|    |:   :..:|..|||..||||:|.:::       
Zfish   549 LPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKI---KSEIRRQGGIQLLVDLLDHRMT------- 603

  Fly   214 QLSPDDLESLDMTRAGARALFTLADSKHNMEQ---MRKSGIVPLMAQLL-KSCHIDVVIPIMGTV 274
                      |:.|:...||..|...|.|.:.   ::..|.:|.:.:|| |:..:::...:.|.:
Zfish   604 ----------DVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDVEIRELLTGVL 658

  Fly   275 RKCSS-----EPKFQ--LAITTEGMIPDIVSHLSSENTELKMEGSTAIYKCAFDGTTRDLVREAG 332
            ...||     .|..|  ||:.|..:   |:.|...:.:.|:.:....::       :..::|.|.
Zfish   659 WNLSSCDALKMPIIQDALAVLTNTV---IIPHSGWDTSPLQDDRKLHLH-------SSQVLRNAT 713

  Fly   333 GLEPLVTIIKD---KNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALL-------- 386
            |....|:...:   :.:||    ..|.|.|:.....|......:|. :|:.:.|.:|        
Zfish   714 GCLRNVSSAGEEARRRMRE----CEGLTDALLYVIQTALGTSEIDS-KTIENCVCILRNLSYRLA 773

  Fly   387 ----------NDECDEVL-TNVTGAISE---C----VRFQSNREQLRQAGGLPAMVSLLNSSHAP 433
                      ::|.|.|| |:.:|..:|   |    .:.:.:.:|....|..|      :||..|
Zfish   774 AETSQGQQMGSEELDGVLCTDASGKDAESSGCWGKKKKKKKSHDQWDGVGPFP------DSSDPP 832

  Fly   434 LLENLAKGLK----------------ECAEDPDSMR----ILEDLDAVRLIWSLLKNPTTR---V 475
                  |||:                ||: :||::.    .|::|.|..  |.:  .||.:   |
Zfish   833 ------KGLQMLWHPSIVKPYLTLLSECS-NPDTLEGAAGALQNLAAGS--WKV--GPTLKPWSV 886

  Fly   476 QAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLKSKDIMVLSAVCAAIATIAQDQTNLAILT 540
            ...||                ||...| :.::|.||:..:..|:.||..|:..:|.|..|..::.
Zfish   887 YIRAA----------------VRKEKG-LPILVELLRIDNDRVVCAVATALRNMALDVRNKELIG 934

  Fly   541 DLKVIYKLADLVQTTDDLLRMNLAAAVAACACFGNNTEELG 581
            .    |.:.|||.....                |||....|
Zfish   935 K----YAMRDLVHRLPG----------------GNNNNSTG 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788
armadillo repeat 144..180 CDD:293788 6/30 (20%)
Arm_3 214..557 CDD:330530 84/405 (21%)
armadillo repeat 245..275 CDD:293788 6/33 (18%)
armadillo repeat 286..318 CDD:293788 5/31 (16%)
armadillo repeat 328..362 CDD:293788 9/36 (25%)
armadillo repeat 411..447 CDD:293788 11/51 (22%)
armadillo repeat 453..484 CDD:293788 9/37 (24%)
armadillo repeat 494..526 CDD:293788 9/31 (29%)
ARM 614..652 CDD:214547
armadillo repeat 619..652 CDD:293788
ctnnd2bNP_001352544.1 PLN03200 547..>720 CDD:331927 42/200 (21%)
armadillo repeat 549..574 CDD:293788 5/24 (21%)
ARM 578..618 CDD:214547 15/59 (25%)
armadillo repeat 582..618 CDD:293788 14/52 (27%)
ARM 622..663 CDD:214547 7/40 (18%)
armadillo repeat 626..661 CDD:293788 6/34 (18%)
armadillo repeat 668..719 CDD:293788 11/60 (18%)
Arm 831..872 CDD:278915 10/47 (21%)
armadillo repeat 835..872 CDD:293788 7/37 (19%)
ARM 889..924 CDD:214547 12/51 (24%)
armadillo repeat 889..923 CDD:293788 12/50 (24%)
armadillo repeat 930..980 CDD:293788 8/46 (17%)
armadillo repeat 986..1021 CDD:293788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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