DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gudu and Ankar

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_038940485.1 Gene:Ankar / 501138 RGDID:1561071 Length:1445 Species:Rattus norvegicus


Alignment Length:631 Identity:121/631 - (19%)
Similarity:235/631 - (37%) Gaps:155/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 ISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSSMKDLKTM 170
            |.|.|.:..|||:|:|...|.....:.:||:|::::.:...:|:..|||.::.:|.|...:|.:.
  Rat   750 ILDAGTIPALVNLLKCPKIKLQCKIVGLLSNISIHVSVVHALVEAGGIPALISLLASDEPELHSR 814

  Fly   171 AAETLANVCKVR---LARKYVRTCGGIPKLVDLIDI-KLSIL------------------KTPRD 213
            .|..|.::.|..   :..||    .|||.|::|:.: |.::|                  |..||
  Rat   815 CAVILYDIAKCENKDVIAKY----NGIPALINLLSLNKENVLVNVMNCIRVLCMGNEGNQKAMRD 875

  Fly   214 Q---------LSPDDLESLDMTRAGARALFTLA----DSKHNMEQMRKSGIVPLMAQLLKSCHID 265
            .         ||.|.    |:.:|.:.|  |:|    |:|...:.:...|.:|.:..|.|...:.
  Rat   876 YNGIHYLIQFLSSDS----DVLKAVSSA--TIAEVGRDNKQVQDAIAMEGAIPPLVALFKGKQLS 934

  Fly   266 VVIP-IMGTVRKCSSEPKFQLAITTEGMIPDIVSHLSSENTELKMEGSTAIYKCAFDGTTRDLVR 329
            |.:. .|......:..|..|.|.....:..|::..|.:...::|.:|:.|::..|..        
  Rat   935 VQVKGAMAVESLANRNPSIQKAFLERKLTKDLLKLLKAFQIDVKEQGAIALWALAGQ-------- 991

  Fly   330 EAGGLEPLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALLNDECDEVL 394
                     |:.:.|.:.|.    .|....|.|.....|.::.:..    ..::||..|.     
  Rat   992 ---------TLKQQKYMAEQ----IGYNFIINMLLSPSAKMQYVGG----EAVIALSKDS----- 1034

  Fly   395 TNVTGAISECVRFQSNREQLRQAGGLPAMVSLLNSS---HAPLLENLAKGLKEC-----AEDPDS 451
                         :.::.|:.:..|:..::.||..|   ...||..:......|     ..:|.|
  Rat  1035 -------------RKHQYQICEGNGIAPLIRLLRISKIAEGTLLSVIRAVGSICIGVAHTSNPMS 1086

  Fly   452 MRILEDLDAVRLIWSLLK-NPTTRVQAHAAYAICPCVRNANDS--AELVRSLVGAMELVVGLLKS 513
            .:.:.:.:|..::..||: :|:..::...|:::. |:...|||  .||..:.......|:.||.|
  Rat  1087 QQCVVEENAFPVLIQLLRSHPSINIKVEVAFSLA-CIVLGNDSLQKELQENEGFEYSDVLYLLHS 1150

  Fly   514 KDIMVLSAVCAAIATIAQD---------QTNLAILTDLK-------------VIYKLADLVQTTD 556
            ||..:......|:...|.:         :|.:..|:..:             ..:::..|.:...
  Rat  1151 KDKEICLRAGYALTLFAFNNRFQQYLILETGMITLSIFEPFLQSRVETERAMAAFQIIVLAKVII 1215

  Fly   557 DLLRMNLAA---AVAACACFGNNTEELG---------------------RLRTVTPIVTYMTSDN 597
            |:..:.|:|   .:.|.:.:..:|..|.                     .|.||..:..::.|:.
  Rat  1216 DMDHITLSARGVTILADSLYSAHTPTLALTGNLIASLAHTRSGIPDAFLTLGTVQRLFYHLYSER 1280

  Fly   598 PLVHRSTAMALEKLSMDPQNCITMHQSGVVPFLLECIGSTNKELQL 643
            ..|..:.:.||..||.:.:....:        |.||....|:.|::
  Rat  1281 EEVRAACSCALGYLSYNARAFRIL--------LTECRNKPNQFLRI 1318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 9/27 (33%)
armadillo repeat 144..180 CDD:293788 9/35 (26%)
Arm_3 214..557 CDD:330530 67/389 (17%)
armadillo repeat 245..275 CDD:293788 6/30 (20%)
armadillo repeat 286..318 CDD:293788 6/31 (19%)
armadillo repeat 328..362 CDD:293788 5/33 (15%)
armadillo repeat 411..447 CDD:293788 8/43 (19%)
armadillo repeat 453..484 CDD:293788 5/31 (16%)
armadillo repeat 494..526 CDD:293788 8/31 (26%)
ARM 614..652 CDD:214547 5/30 (17%)
armadillo repeat 619..652 CDD:293788 5/25 (20%)
AnkarXP_038940485.1 PHA02874 <521..>648 CDD:165205
ANK repeat 537..579 CDD:293786
ANK repeat 581..612 CDD:293786
Ank_2 586..681 CDD:403870
ANK repeat 614..648 CDD:293786
ANK repeat 650..681 CDD:293786
armadillo repeat 715..739 CDD:293788
PLN03200 <717..>1130 CDD:215629 88/433 (20%)
armadillo repeat 750..781 CDD:293788 11/30 (37%)
armadillo repeat 788..823 CDD:293788 9/34 (26%)
armadillo repeat 828..862 CDD:293788 9/37 (24%)
armadillo repeat 870..901 CDD:293788 9/36 (25%)
armadillo repeat 1038..1076 CDD:293788 7/37 (19%)
armadillo repeat 1087..1122 CDD:293788 5/35 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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