DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and p120ctn

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster


Alignment Length:638 Identity:131/638 - (20%)
Similarity:218/638 - (34%) Gaps:211/638 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AAEDSDTTE---------VESSTDEEERWKEVARAAEIP------ADYYNIQKLVKYIK------ 78
            |.:..||:|         ::|         |....|.:|      |:|..||.....||      
  Fly   105 AGQYEDTSEYGVAGLTCGIDS---------EYTAEAVVPYCYTSDANYTGIQNTTSSIKPFSGRP 160

  Fly    79 -----------AGNQTATIVSLCCLKDYDLSTQINQFAISDIG----GLDVLVNILECSDTKCCL 128
                       |.:|..|..|....|       :.|||:|.|.    .|:...:.:|.|:.    
  Fly   161 FNDNINGAEAVADSQCRTFKSSAEFK-------LPQFAMSSINTVPQRLEEKDDYIEGSEN---- 214

  Fly   129 GALKVLSDITLNIDIRKTIVDLD-GIPLIVDILNSSMKDLKTMAAETLANVCKVRLARKY-VRTC 191
                         ||..|:...| .:..::..|::....:|..||..|.::|.:....|. .|:.
  Fly   215 -------------DICSTMRWRDPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSL 266

  Fly   192 GGIPKLVDLIDIKLSILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQMR----KSGIV 252
            ||||.||.|:                 ..:|.::.:....||..|:..:.|.|..|    ..||.
  Fly   267 GGIPPLVRLL-----------------SYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGIA 314

  Fly   253 PLMAQLLKSCHIDVVIPIMGTVRKCSSEPKFQLAITTEGMIPDIVSHLSSENTELKMEGSTAIYK 317
            .|:..|.:|...:|...:.|.:...||....:.:|..|.::..:.|.:...:      |..|:  
  Fly   315 ALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHS------GWDAV-- 371

  Fly   318 CAFDGTTRDLVREAGG----------------------LEPLVTIIK---DKNVRENKPLLRGAT 357
            |..:.....:.|.|.|                      :|.|:.:::   :||...||       
  Fly   372 CCGETCFSTVFRNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNK------- 429

  Fly   358 GAIWMCAVTDANVKVLDQLRTVNHLVALLND---ECDEV-----------------LTNVTGAIS 402
                                ||.:.|.:|.:   .|.||                 .::..|...
  Fly   430 --------------------TVENCVCILRNLSYRCQEVDDPNYDKHPFITPERVIPSSSKGENL 474

  Fly   403 ECVRFQSNREQLRQAGGLPAM----VSLLNSSHAPLLENLAKGLKECAEDPDSMRILEDLDAVRL 463
            .|  |.:|::: ::|....|:    :|...|..:.....|.||.::          |...:.|:.
  Fly   475 GC--FGTNKKK-KEANNSDALNEYNISADYSKSSVTYNKLNKGYEQ----------LWQPEVVQY 526

  Fly   464 IWSLLK---NP-TTRVQAHAAYAICPCV-RNANDSAELVRSLVGAMELVVGLLKSKDIMVLSAVC 523
            ..|||:   || |....|.|...:..|. :.:.|....||...| :.::|.||:.:...|:.||.
  Fly   527 YLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKG-LPILVELLRMEVDRVVCAVA 590

  Fly   524 AAIATIAQDQTNLAILTDLKVIYKLADLVQ------------TTDDLLRMNLA 564
            .|:..:|.||.|..::..    |.:.||||            |:||.:...||
  Fly   591 TALRNLAIDQRNKELIGK----YAMRDLVQKLPSGNVQHDQNTSDDTITAVLA 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 6/32 (19%)
armadillo repeat 144..180 CDD:293788 7/36 (19%)
Arm_3 214..557 CDD:330530 81/412 (20%)
armadillo repeat 245..275 CDD:293788 8/33 (24%)
armadillo repeat 286..318 CDD:293788 5/31 (16%)
armadillo repeat 328..362 CDD:293788 9/58 (16%)
armadillo repeat 411..447 CDD:293788 7/39 (18%)
armadillo repeat 453..484 CDD:293788 10/34 (29%)
armadillo repeat 494..526 CDD:293788 9/31 (29%)
ARM 614..652 CDD:214547
armadillo repeat 619..652 CDD:293788
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 29/130 (22%)
armadillo repeat 227..252 CDD:293788 5/24 (21%)
armadillo repeat 260..296 CDD:293788 13/52 (25%)
armadillo repeat 304..339 CDD:293788 8/34 (24%)
ARM 307..442 CDD:237987 28/169 (17%)
armadillo repeat 347..392 CDD:293788 9/52 (17%)
armadillo repeat 515..556 CDD:293788 11/50 (22%)
ARM 516..643 CDD:237987 36/139 (26%)
armadillo repeat 562..596 CDD:293788 10/34 (29%)
armadillo repeat 601..641 CDD:293788 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
21.940

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