DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gudu and ARMC3

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_775104.2 Gene:ARMC3 / 219681 HGNCID:30964 Length:872 Species:Homo sapiens


Alignment Length:617 Identity:127/617 - (20%)
Similarity:229/617 - (37%) Gaps:134/617 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 IVSLCC--LKDYDLSTQINQFAISDIGGLDVLVNILECSDTKCCLGALKVLSDITLNIDIRKTIV 148
            |::..|  :..:.|..:.|:..:.::|.::.|..:|...|......|..:...:..|.|::|.:.
Human    41 ILAKACEAIYKFALKGEENKTTLLELGAVEPLTKLLTHEDKIVRRNATMIFGILASNNDVKKLLR 105

  Fly   149 DLDGIPLIVDILNSSMKDL---KTMAAETLANVCKVRLARKYVRTC-----GGIPKLVDLIDIKL 205
            :|       |::||.:..|   :.:.....|::|...::.:|....     ||:..|:.|:.   
Human   106 EL-------DVMNSVIAQLAPEEEVVIHEFASLCLANMSAEYTSKVQIFEHGGLEPLIRLLS--- 160

  Fly   206 SILKTPRDQLSPDDLESLDMTRAGARALFTLADSKHNMEQMRKSGIVPLMAQLLKSCHIDVVIPI 270
                      |||.    |:.:.....::.|........::::...:|.:..|||          
Human   161 ----------SPDP----DVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLK---------- 201

  Fly   271 MGTVRKCSSEPKFQ-LAITTEGMIPDI------------VSHL-----SSENTELKMEGSTAIYK 317
                   |..|..| ||:.|.|:|.:.            :.||     :.|..:|.:|....|..
Human   202 -------SEYPVIQLLALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIAN 259

  Fly   318 CAFDGTTRDLVREAGGLEPLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHL 382
            |..|..|...:::.|||:.|::..::..:.:   :.:.|..||...|....|.|:..:......|
Human   260 CLEDMDTMVQIQQTGGLKKLLSFAENSTIPD---IQKNAAKAITKAAYDPENRKLFHEQEVEKCL 321

  Fly   383 VALLNDECDEVLTNVTGAISECVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAE 447
            ||||..|.|......:.|||.......:::..... |:|.::.||.|.:..:.|..|..      
Human   322 VALLGSENDGTKIAASQAISAMCENSGSKDFFNNQ-GIPQLIQLLKSDNEEVREAAALA------ 379

  Fly   448 DPDSMRILEDLDAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLK 512
                                |.|.||...|           |||.:||     ...::.::.||.
Human   380 --------------------LANLTTCNPA-----------NANAAAE-----ADGIDPLINLLS 408

  Fly   513 SK-DIMVLSAVCAAIATIAQDQTNLAILTDLK-------VIYKLADLVQTTDDLLRMNLAAAVAA 569
            || |        .|||..|...||:|:...|:       :::.:...:::.:.:::...|.||.|
Human   409 SKRD--------GAIANAATVLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKAALAVTA 465

  Fly   570 CACFGNNTEELGRLRTVTPIVTYMTSDNPLVHRSTAMALEKLSMDPQNCITMHQSGVVPFLLEC- 633
            .||......||.....:.|:|..:.|.|..|.:..:.|:...:.|......:.:.|.:..|.|. 
Human   466 TACDVEARTELRNSGGLEPLVELLRSKNDEVRKHASWAVMVCAGDELTANELCRLGALDILEEVN 530

  Fly   634 IGST--NKELQLAAAGCLRNIRELALRAEEYL 663
            :..|  ||..:.|....|.|...|......||
Human   531 VSGTRKNKFSEAAYNKLLNNNLSLKYSQTGYL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 5/28 (18%)
armadillo repeat 144..180 CDD:293788 7/38 (18%)
Arm_3 214..557 CDD:330530 76/368 (21%)
armadillo repeat 245..275 CDD:293788 4/29 (14%)
armadillo repeat 286..318 CDD:293788 10/48 (21%)
armadillo repeat 328..362 CDD:293788 7/33 (21%)
armadillo repeat 411..447 CDD:293788 7/35 (20%)
armadillo repeat 453..484 CDD:293788 5/30 (17%)
armadillo repeat 494..526 CDD:293788 7/32 (22%)
ARM 614..652 CDD:214547 9/40 (23%)
armadillo repeat 619..652 CDD:293788 8/35 (23%)
ARMC3NP_775104.2 ARM 1 15..54 2/12 (17%)
armadillo repeat 21..52 CDD:293788 2/10 (20%)
HEAT_2 32..108 CDD:290374 13/73 (18%)
ARM 2 57..96 6/38 (16%)
armadillo repeat 60..96 CDD:293788 5/35 (14%)
ARM 63..179 CDD:237987 25/139 (18%)
ARM 3 98..138 9/46 (20%)
HEAT repeat 106..137 CDD:293787 7/37 (19%)
ARM 4 140..179 10/55 (18%)
armadillo repeat 143..177 CDD:293788 8/50 (16%)
ARM 145..259 CDD:237987 27/147 (18%)
HEAT_2 152..258 CDD:290374 24/139 (17%)
ARM 5 181..220 12/55 (22%)
armadillo repeat 184..220 CDD:293788 12/52 (23%)
ARM 6 222..262 7/39 (18%)
armadillo repeat 225..259 CDD:293788 6/33 (18%)
ARM 7 264..304 8/42 (19%)
ARM 8 306..345 12/38 (32%)
ARM 321..426 CDD:237987 38/155 (25%)
ARM 9 346..385 9/65 (14%)
armadillo repeat 358..383 CDD:293788 7/50 (14%)
ARM 10 388..427 17/62 (27%)
armadillo repeat 391..436 CDD:293788 17/57 (30%)
ARM 11 429..468 5/38 (13%)
ARM 435..529 CDD:237987 17/93 (18%)
armadillo repeat 435..465 CDD:293788 3/29 (10%)
ARM 12 470..509 8/38 (21%)
armadillo repeat 473..503 CDD:293788 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..693
EDR1 <720..858 CDD:291079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0167
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.