DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gudu and Jup

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_034723.1 Gene:Jup / 16480 MGIID:96650 Length:745 Species:Mus musculus


Alignment Length:685 Identity:143/685 - (20%)
Similarity:242/685 - (35%) Gaps:204/685 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRKKKEQCGSCPNRFSKDKRQVAAEDSD---TTEVESSTDEEERWKEVARAAEIPADYYNIQKLV 74
            :|.|:.:...||.        |:.|||.   .|:||..|...:|..|.::..:..     |..|:
Mouse    80 ARAKRVREAMCPG--------VSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSA-----IVHLI 131

  Fly    75 KYIKAGNQTATIVSLCCLKDYDLSTQINQFAISDIGGLDVLVNILECSDTKCCLGALKVLSDITL 139
            .|               ..|.:|:|:          .|..|..:|...|......|..:::.::.
Mouse   132 NY---------------QDDAELATR----------ALPELTKLLNDEDPVVVTKAAMIVNQLSK 171

  Fly   140 NIDIRKTIVDLDGIPLIVDILNSSMK---DLKTMAAET--LANVCKVRLARKYVRTCGGIPKLVD 199
            ....|:.::   |.|.:|..:..:|:   ||.|....|  |.|:...|.....:...||||.|| 
Mouse   172 KEASRRALM---GSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALV- 232

  Fly   200 LIDIKLSILKTPRDQL---SPDDLESLDMTRAGARALFTLADSKHNMEQMRKSGIVPLMAQLLKS 261
                  .:|.:|.:.:   :...|.:|.:.:.||:....|||....|        |||:.:    
Mouse   233 ------RMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKM--------VPLLNK---- 279

  Fly   262 CHIDVVIPIMGTVRKCSSEPKFQLAITTEGMIPDIVSHLSSENTELKMEGSTAIYKCAFDGTTRD 326
                             :.||| |||||     |.:..|:..|.|.|:                 
Mouse   280 -----------------NNPKF-LAITT-----DCLQLLAYGNQESKL----------------- 304

  Fly   327 LVREAGGLEPLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALLNDECD 391
            ::...||.:.||.|:::.:..:          .:|   .|...:|||                  
Mouse   305 IILANGGPQGLVQIMRNYSYEK----------LLW---TTSRVLKVL------------------ 338

  Fly   392 EVLTNVTGAISECVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAEDPDSMRILE 456
                      |.|   .||:..:.:|||:.|:...|.|:...|::|....|:..::.......||
Mouse   339 ----------SVC---PSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLE 390

  Fly   457 DLDAVRLIWSLLKNPTTRVQAHAAYAICPCVRNANDSAELVRSLVGAMELVVGLLKS--KDIMVL 519
            .:  ::::.:.|......|...|...:.....|.:.:..||....|...|:..:|::  ||.:..
Mouse   391 SV--LKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITE 453

  Fly   520 SAVCA--------AIATIAQDQTNLAILTDLKVIYKLAD------LVQTTDDLLRMNLAAAVAAC 570
            .||||        ..|.:||:...|..  .:..|.||.:      ||:.|..|:| |||...|  
Mouse   454 PAVCALRHLTSRHPEAEMAQNSVRLNY--GIPAIVKLLNQPNQWPLVKATIGLIR-NLALCPA-- 513

  Fly   571 ACFGNNTEELGRLRTVTPIVTYMTSDNPLVHRSTAM---------------------ALEKLSMD 614
                 |...|.....:..:|..:...:....|..|.                     ||..|:.|
Mouse   514 -----NHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARD 573

  Fly   615 PQNCITMHQSGVVPFLLECIGSTNKELQLAAAGCL 649
            |.|.:.:.:...:|..::.:.|:.:.:|..|||.|
Mouse   574 PMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 5/28 (18%)
armadillo repeat 144..180 CDD:293788 11/40 (28%)
Arm_3 214..557 CDD:330530 74/361 (20%)
armadillo repeat 245..275 CDD:293788 3/29 (10%)
armadillo repeat 286..318 CDD:293788 9/31 (29%)
armadillo repeat 328..362 CDD:293788 5/33 (15%)
armadillo repeat 411..447 CDD:293788 9/35 (26%)
armadillo repeat 453..484 CDD:293788 5/30 (17%)
armadillo repeat 494..526 CDD:293788 11/41 (27%)
ARM 614..652 CDD:214547 10/36 (28%)
armadillo repeat 619..652 CDD:293788 7/31 (23%)
JupNP_034723.1 ARM 6 342..381 11/38 (29%)
armadillo repeat 345..380 CDD:293788 9/34 (26%)
ARM 7 383..420 5/38 (13%)
armadillo repeat 393..418 CDD:293788 3/24 (13%)
ARM 8 423..464 11/40 (28%)
armadillo repeat 426..464 CDD:293788 11/37 (30%)
ARM 9 470..510 13/42 (31%)
armadillo repeat 470..508 CDD:293788 11/40 (28%)
ARM 10 512..551 6/45 (13%)
armadillo repeat 515..572 CDD:293788 7/56 (13%)
Interaction with DSC1. /evidence=ECO:0000250 574..661 9/35 (26%)
armadillo repeat 577..611 CDD:293788 7/32 (22%)
armadillo repeat 618..652 CDD:293788
Adaptin_N <120..>289 CDD:366724 48/238 (20%)
Interaction with DSC1 and DSG1. /evidence=ECO:0000250 132..297 50/234 (21%)
armadillo repeat 144..169 CDD:293788 5/24 (21%)
armadillo repeat 186..212 CDD:293788 7/25 (28%)
armadillo repeat 221..253 CDD:293788 9/38 (24%)
ARM 221..253 CDD:214547 9/38 (24%)
armadillo repeat 261..297 CDD:293788 17/70 (24%)
ARM 5 298..341 14/100 (14%)
armadillo repeat 305..338 CDD:293788 8/45 (18%)
PLN03200 <328..>658 CDD:215629 69/327 (21%)
ARM 341..381 CDD:214547 12/42 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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