DRSC/TRiP Functional Genomics Resources

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Protein Alignment gudu and Arvcf

DIOPT Version :9

Sequence 1:NP_609111.1 Gene:gudu / 34014 FlyBaseID:FBgn0031905 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001258957.1 Gene:Arvcf / 11877 MGIID:109620 Length:962 Species:Mus musculus


Alignment Length:662 Identity:119/662 - (17%)
Similarity:221/662 - (33%) Gaps:205/662 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IGTSSGTSHNRSRKKKEQCGSCPNRFSKDKRQVAAEDSDTTEVE--------------------- 45
            :|:.||....||..:..|..  |.....|.|.:||:|....::|                     
Mouse   240 MGSESGPPSGRSLPEHFQAE--PYGLEDDTRSLAADDEGGPDLEPDYSTATRRRPEYGRGLRARA 302

  Fly    46 ----------------------------------------------SSTDEEERWKEVARAAEIP 64
                                                          .||.:|.||::    .|:|
Mouse   303 FEDTADDAGELIEERPPFPAATAPLAQPERGSLGSLDRVVRRSPSVDSTRKEPRWRD----PELP 363

  Fly    65 ADYYNIQKLVKYIKAGNQTATIVSLCCLKDYDLSTQINQFAISDIGGLDVLVNILECSDT----K 125
            .....::..|..:|| |..|.:..| |.::..:..::.|     :.||.:||.:|:....    :
Mouse   364 EVLAMLRHPVDPVKA-NAAAYLQHL-CFENEGIKRRVRQ-----LRGLPLLVALLDHPRAEVRRR 421

  Fly   126 CCLGALKVLSDITLNIDIRKTIVDLDGIPLIVDILNSSM-KDLKTMAAETLANVCKVRLARKYVR 189
            .| |||:.|| ...:.|.:..|.|..|:|.:|.:|.::. .:::.:...||.|:....       
Mouse   422 AC-GALRNLS-YGRDTDNKAAIRDCGGVPALVRLLRAARDNEVRELVTGTLWNLSSYE------- 477

  Fly   190 TCGGIPKLVDLIDIKLSIL------------KTPRDQLSPDDLESLDMTRAGARALFTL-ADSKH 241
                 |..:.:||..|..|            :.|.:...|.|.|...:.:..:..|..: :|...
Mouse   478 -----PLKMVIIDHGLQTLTHEVIVPHSGWEREPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAE 537

  Fly   242 NMEQMRK-SGIVPLMAQLLKSC-----------------------HIDVVIPIMGTVRKCSSEPK 282
            ...::|: .|:|..:...|:|.                       |:...:|  |..|...:||.
Mouse   538 ARRRLRECEGLVDALLHALQSAVGRKDTDNKSVENCVCIMRNLSYHVHKEVP--GADRYQEAEPG 600

  Fly   283 FQLAITTEGMIPDIVS------------HLSSENTELKMEGSTAIYKCAFDGTTRDLVREAGGLE 335
            ...:.|::....|..|            |...::.|:...         ||  |.||.:.....:
Mouse   601 IPGSTTSQRRRKDDASCFGGKKAKEEWFHQGKKDAEMDRN---------FD--TLDLPKRTEAAK 654

  Fly   336 PLVTIIKDKNVRENKPLLRGATGAIWMCAVTDANVKVLDQLRTVNHLVALLNDECDEVLTNVTGA 400
            ....:.:.:.||            :::..:|::        |..|.|.|...     .|.|::..
Mouse   655 GFELLYQPEVVR------------LYLSLLTES--------RNFNTLEAAAG-----ALQNLSAG 694

  Fly   401 ISECVRFQSNREQLRQAGGLPAMVSLLNSSHAPLLENLAKGLKECAEDPDSMRILEDLDAVRLIW 465
            ......:  .|..:|:..|||.:|.||.|....::..:|..|:..:.|..:    :||.....:.
Mouse   695 NWTWATY--IRATVRKERGLPVLVELLQSETDKVVRAVAIALRNLSLDQRN----KDLIGSYAMT 753

  Fly   466 SLLKN---------PTTRVQAHAAYAICPCVRN-ANDSAELVRSLV---GAMELVVGLLKSKDIM 517
            .|::|         |:..::.....|:...:.. .:||.:..|||:   |...||..:..|:.:.
Mouse   754 ELVRNVRNAQAPAHPSAHLEEDTVVAVLNTIHEIVSDSLDNARSLLQARGVPALVALVASSQSVR 818

  Fly   518 VLSAVCAAIATI 529
            ...|....:.|:
Mouse   819 EAKAASHVLQTV 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
guduNP_609111.1 armadillo repeat 105..134 CDD:293788 9/32 (28%)
armadillo repeat 144..180 CDD:293788 9/36 (25%)
Arm_3 214..557 CDD:330530 64/366 (17%)
armadillo repeat 245..275 CDD:293788 8/53 (15%)
armadillo repeat 286..318 CDD:293788 5/43 (12%)
armadillo repeat 328..362 CDD:293788 2/33 (6%)
armadillo repeat 411..447 CDD:293788 11/35 (31%)
armadillo repeat 453..484 CDD:293788 6/39 (15%)
armadillo repeat 494..526 CDD:293788 8/34 (24%)
ARM 614..652 CDD:214547
armadillo repeat 619..652 CDD:293788
ArvcfNP_001258957.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..123
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..255 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..291 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..357 3/34 (9%)
ARM 1 350..389 13/44 (30%)
ARM 357..475 CDD:237987 32/130 (25%)
HEAT_2 362..464 CDD:290374 27/110 (25%)
armadillo repeat 362..387 CDD:293788 6/25 (24%)
ARM 2 392..431 12/45 (27%)
armadillo repeat 395..431 CDD:293788 12/42 (29%)
ARM 3 435..469 7/33 (21%)
armadillo repeat 438..473 CDD:293788 8/34 (24%)
ARM 439..581 CDD:237987 25/153 (16%)
ARM 4 470..510 8/51 (16%)
armadillo repeat 480..531 CDD:293788 9/50 (18%)
ARM 5 528..567 7/38 (18%)
ARM 6 577..623 9/47 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 593..618 6/24 (25%)
Nuclear localization signal. /evidence=ECO:0000255 608..624 2/15 (13%)
ARM 7 647..687 7/64 (11%)
ARM 657..757 CDD:237987 24/130 (18%)
armadillo repeat 657..693 CDD:293788 9/60 (15%)
ARM 8 700..739 11/40 (28%)
armadillo repeat 703..737 CDD:293788 11/33 (33%)
ARM 9 740..782 7/45 (16%)
armadillo repeat 744..789 CDD:293788 6/44 (14%)
ARM 10 783..827 10/43 (23%)
armadillo repeat 795..827 CDD:293788 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 844..962
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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