DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5149 and oxr1b

DIOPT Version :9

Sequence 1:NP_609110.1 Gene:CG5149 / 34013 FlyBaseID:FBgn0031904 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_005159515.1 Gene:oxr1b / 570476 ZFINID:ZDB-GENE-030131-2438 Length:841 Species:Danio rerio


Alignment Length:463 Identity:99/463 - (21%)
Similarity:170/463 - (36%) Gaps:115/463 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TDNLYNSEEL-RMLESAYKNASGGALEKLT------------QDRLVETWSQTIERSL------- 54
            |.:::|.|.. .:||:..::.||...:..|            :|.:.||.....::||       
Zfish   418 TTDVFNEESCENVLENVQRDQSGDEPKSRTTSESLCSDTVAVEDAVKETQKSLEDQSLQASSDVK 482

  Fly    55 -------AESTAQYLFTPTKPGQQCVNLQLKKFGEPYYIMERGTIDQKMQMLL----GSMERSGN 108
                   ::|||     ..:||.:    :..|..|......||....|:...|    |...|...
Zfish   483 EGELRTDSDSTA-----AVEPGAE----EGLKSAEEVVPGLRGKQKSKLHKFLCLRVGRAMRKTF 538

  Fly   109 DTFNSKQLEQYIYSVIKSYVHLESTAKNSGIKEWHDLGFNT-TERSAATFA-------------- 158
            .:..|..::||.....|                 |:..|.. :|||...|.              
Zfish   539 VSHASASMQQYAQRDRK-----------------HEYWFAVPSERSDHLFGFFVQWTPDVYGEGF 586

  Fly   159 KGLMRNLG------------KELEHTMPNDALERWLHVTPQFLQIWREVFSQLYCRHGGSKRNII 211
            .||.|..|            .|.:..:|:...:.|..|:.      .|.:.::...:....|::.
Zfish   587 GGLTREPGFVVVKKNQDAESGEQDKPVPDITFKDWEVVSV------AEYYRRIDALNSEDLRSLC 645

  Fly   212 KEMEIPI-------LPALCDAPQNSHYRPIIELPHVLYINAQL--------PREHRHKWRFLFSS 261
            |.::|..       |....| |:...:||.:..|.||.....:        ||...:.|...||:
Zfish   646 KRLQITTKEEVNSKLMVKSD-PEPETFRPNLTEPSVLLQPEHIEKLAKHLPPRTIGYPWSLAFST 709

  Fly   262 KINGESFSTMLGKVLDK-GPTLFFIEDEDQYIFGGYASETWSVKPQFGGDDSSLLYTLSPAMRCF 325
            ..:|.|..::...:..: .|.|..|:|.|..:||..||:.:.|...|.|...:.::|..|....|
Zfish   710 SKHGMSMKSLYRAMQSQDSPVLMVIKDSDGQMFGALASQPFKVSDGFYGTGETFVFTFYPEFEVF 774

  Fly   326 SATTYNNHYQYLNLNQQTMPNGLGMGGQFDFWGLWIDCSFGDGQSVESCTTYRDYVQLSKRKQFK 390
            ..|..|..:...:::...:..|   ||:|   |||:|.....|:: .||.|:.: ..|||.:.|.
Zfish   775 KWTGDNMFFIKGDMDSLAVGGG---GGEF---GLWLDGDLYHGRT-HSCKTFGN-PMLSKTEDFF 831

  Fly   391 IRNMEVWA 398
            ::::|:||
Zfish   832 VQDIEIWA 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5149NP_609110.1 DMP12 11..>67 CDD:293384 15/82 (18%)
TLDc 232..400 CDD:214733 48/176 (27%)
oxr1bXP_005159515.1 LysM <73..141 CDD:224306
LysM 99..141 CDD:279777
TLDc 681..841 CDD:214733 44/167 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.870

Return to query results.
Submit another query.