DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and XIB

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_171912.2 Gene:XIB / 839246 AraportID:AT1G04160 Length:1500 Species:Arabidopsis thaliana


Alignment Length:118 Identity:25/118 - (21%)
Similarity:32/118 - (27%) Gaps:44/118 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QYFNSHRCGGSVLDNKWVLTAAHCTQGLDPSSLAVRLGSSE-----------HATGGTLVGVLRT 122
            |.||........|..|..|..||.:     |.|.|.|...|           ...||.|..:   
plant    22 QMFNDGGPAAKELAPKLDLVKAHLS-----SRLGVTLPKIEVRQVVATIIALKGVGGLLFVI--- 78

  Fly   123 VEHPQYDGNTID------------------YDFSLMELETELTFSDAVQPVEL 157
                   |||..                  |::...|....|..::.:|.|.|
plant    79 -------GNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLTEFLQSVAL 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 25/118 (21%)
MYSc_Myo21 346..1022 CDD:276848
XIBNP_171912.2 Myosin_N 8..52 CDD:460670 10/34 (29%)
MYSc_Myo11 76..720 CDD:276835 9/59 (15%)
CCDC158 <724..>1081 CDD:464943
MyosinXI_CBD 1097..1470 CDD:271259
Blue background indicates that the domain is not in the aligned region.

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