DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo15b

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_017214038.2 Gene:myo15b / 795537 ZFINID:ZDB-GENE-030131-4797 Length:1899 Species:Danio rerio


Alignment Length:789 Identity:151/789 - (19%)
Similarity:268/789 - (33%) Gaps:250/789 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   822 IIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYA 886
            ::.....|.:.|.|...||::|.|..|..:.:..:|..         :....:|.|:....:.:.
Zfish     5 VVAKVHNFLNKNHDQFRPEVLELFARSRLQMVSGLFRK---------VQERYIQQKELGRARGHR 60

  Fly   887 LNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQ 951
                        |.:.|:||||:   .:|.::.::.......||||.:.:....|..|..|.:..
Zfish    61 ------------NQMSTVAANFQ---QSLTELTTRLERCKTTFVRCFKPNYVKLPGIFDVDYITT 110

  Fly   952 QMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEMT-KDNCRLLFLRLKMEG--WA 1013
            |::..|:|:|:..|::||..|:||.:|:.||..|.  ...|:..: ::....|...:..|.  :.
Zfish   111 QLRHGGILETIHIRKEGFPIRIPFAQFMERYGVLL--SQRPINQSLEEQVVTLIETIGAEDGQYQ 173

  Fly  1014 LGKTKVFLRYYNDEFLARLYELQVKK---------VIKVQSMMRALLARKRVKGGKVFKLGKKGP 1069
            ||.|||||:       ..||: ||::         .:.:|..:|..:.|:.      |:..||  
Zfish   174 LGLTKVFLK-------ETLYQ-QVEEKWSSTQTWAAVTIQRNIRGFICRRN------FQFFKK-- 222

  Fly  1070 EHHDVAASKIQKAFRGFRDRVRLPPLVN-----EKSGQLNENTADFIRPFAKKWREKSIFQVLLH 1129
                 .|..||...||.:.|.....|..     ..:..:..||..     .:.|:|        |
Zfish   223 -----KAIVIQSHIRGHQARKYFKQLKQCFTQFWATMMITRNTIK-----RRHWKE--------H 269

  Fly  1130 YRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFE---RINMREVNS-----SQLGPLPVPIK 1186
            ...:|.::....:..    :..|..|:.:    :|.|   |:......|     |::.|..|...
Zfish   270 TDRSRVKEVAKPTSS----SSEMDVGILE----IPAELSARLRSSSGRSQGSGVSEVAPPQVKAD 326

  Fly  1187 ---KMPFRLDQIPFYDTQYMVDPANSISR------QAFPNQLLTQHMEDDEPWDSPLQRNPSMTS 1242
               .:|..:|:.||  :||    ||::.:      |.:|.|         .|..| |....:.|:
Zfish   327 HKLSLPLDIDRHPF--SQY----ANTVLKDGWCQAQGYPLQ---------RPLTS-LDHEDARTA 375

  Fly  1243 CALTYNAYKKEQACQTNWDRMGESDNIYNQGYFRDPQQLR---RNQMQMNMNAYNNAYNSYNSNY 1304
            ..:    ||.......:.|..|..:.:.. .|..:..|:|   |:::...:     .|.:::.:.
Zfish   376 LEI----YKLILRFTGDSDLNGWQEQMLG-NYIVEKSQIRPGIRDEILAQL-----VYLTWDGDR 430

  Fly  1305 NNQNWGVHRSGSRRNSLKGY--------AAPPPPPPPMPSSNYYRNNPNQQQRNYQQR---SSYP 1358
            ...|            |:|:        |..|.|....|...|..:....:.|:..|.   :|.|
Zfish   431 QETN------------LRGWLLLACCLSAFTPSPDLEKPLLKYVSDRGPGEYRSLCQHKLLTSLP 483

  Fly  1359 -PSDPVRELQNMARNEGDNSEDPPFNFKAMLRKTNYPRGSETNTYDFNNRRGSDSGDQHTFQPPK 1422
             ||...|             ..||...:                :..|.|:|....:.:||...|
Zfish   484 LPSPACR-------------RHPPTQLE----------------WTANQRKGKMVLEVNTFNEEK 519

  Fly  1423 LR------STGRRYQD---------------------DEGYNSSSG------------------- 1441
            |.      :||.....                     |||:...:|                   
Zfish   520 LAVEVESWTTGEELASWILSYRGLTNATQGWSVSLLADEGWTDLTGCDFVMDLLAGVESDVPMGH 584

  Fly  1442 -----NYGVSRKFGQQQR---------APTLRQSPASVGRSFEDSNARSFEEAGSYVEEEIAPGI 1492
                 :|..|....:.:.         ||:: |:|..  .|||.|:..::|...:|   :.:.|.
Zfish   585 PPTENDYLFSDTSDRMETTDIDAFIPPAPSM-QAPGL--PSFEASHWNTYEPLSTY---QGSQGR 643

  Fly  1493 TLSGYAVDI 1501
            .:..|..||
Zfish   644 QMDSYVDDI 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
S_TKc 16..282 CDD:214567
MYSc 327..1034 CDD:214580 50/214 (23%)
MYSc_Myo21 346..1022 CDD:276848 48/202 (24%)
myo15bXP_017214038.2 Motor_domain <5..182 CDD:328930 48/202 (24%)
IQ 221..241 CDD:279006 8/26 (31%)
MyTH4 359..503 CDD:321946 32/204 (16%)
GGN <812..>962 CDD:330621
SH3 1262..1316 CDD:327375
MyTH4 1476..1581 CDD:307090
FERM_B-lobe 1590..1791 CDD:324381
FERM_C_MyoXV 1787..1887 CDD:270022
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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