DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo10

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_005171458.2 Gene:myo10 / 569779 ZFINID:ZDB-GENE-070912-277 Length:2069 Species:Danio rerio


Alignment Length:1297 Identity:315/1297 - (24%)
Similarity:528/1297 - (40%) Gaps:267/1297 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 DRGYVKRFDEKP---EKMYP---------EDLAALENPVDENIIESLRHRILMGESYSFIGDILL 370
            |.|.|..:.:..   :::||         ||:|||::..|..|:.:|..|......|::||.||:
Zfish    37 DYGQVYTYKQNAVSRQRVYPMHSSSITSVEDMAALQDLHDGAILHNLHLRYTQKAIYTYIGSILV 101

  Fly   371 SLNSNE-IKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTN 434
            ::|..| :...:......:|......|..|||:::|:..|:.:......|.:::||||.:||:.:
Zfish   102 AVNPYESLSGLYDGAAVERYSRHHLGEIPPHIYAIANECYRSLWKRSNNQCVLISGESGAGKTES 166

  Fly   435 ARLLIKHLCYLG------DGNRGATGRVESSIKAILMLV----NAGTPVNNDSTRCVLQYCLTFG 489
            .:::::.|..:.      ..::.|:..||.:|.....::    ||.|..||:|:|......|.|.
Zfish   167 TKMILRFLSAMSQQSAALSTSKTASSHVEEAILESSPIMEAFGNAKTVHNNNSSRFGKFIQLHFS 231

  Fly   490 KTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPE 554
            :.|.:.|.....|:|||.||...:..:.|:||||......:.: |.:.::|.|...:.||.....
Zfish   232 QHGNIQGGRITDYLLEKNRVVRQNPGERNYHIFYALLAGTSAE-QKESFSLSAPEGFHYLGQSGC 295

  Fly   555 VPPSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQNGKYAEVE 619
            |        :|....:.|.::|..|.||.:.|..:.::.|.::|:.||::|||.|...|. |:|.
Zfish   296 V--------KDKAINDTETFQEVLNALRTMQFGEENIKEVLRLLSGILHVGNIEFLTAGG-AQVC 351

  Fly   620 NTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIIN 684
            :...:|:.|:||.:|..:....||:..|:..|.......|.|:|.|:||::|..|||:...:||.
Zfish   352 SKTALSKAADLLGLDCAQLAEVLTHRSMILRGEEISTPLTVEQAVDSRDSMAMALYSQCFTWIIR 416

  Fly   685 RINMNMSFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEA 749
            ::|..::...    |..:|.|.|:||||.|..|..||..||..||::|.::|:.||..|.||...
Zfish   417 KLNNRINGSE----DFRSIGILDIFGFENFEVNRFEQFNINYANEKLQEYFNKHIFSLEQLEYNK 477

  Fly   750 EDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQD-LIMDRVSEKHSQ---FVKKHTA 810
            |.:...::|:.||...|| |:.|..||..::::.|...:..| .:::::..:||:   ::|...|
Zfish   478 EGLVWDDVNWMDNGECLD-LIEKKLGLLALVNEESHFPKGTDGTLLEKLHSQHSRNQFYIKPRVA 541

  Fly   811 T-EISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAV 874
            . :..:.||.|.::||.|...:.|||        |||   |:.:.|:..::|....:|   ||.|
Zfish   542 VHQFGIKHYAGEVVYDVRGILEKNRD--------TFR---DDVLNLLRESRLDFVYDL---FERV 592

  Fly   875 QHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEY 939
            ......:         :..|.|:... .|:::.|:.:..:|:..||.:   ...|||||:.::..
Zfish   593 NAWTGQD---------TVKCGSKYRR-PTVSSQFKNSLHSLMSTLSTS---NPFFVRCIKPNISK 644

  Fly   940 KPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFL--AFDFDEPVEMTKDNCRL 1002
            .|..|...||..|::..|:|:||..|:.||..|..|.:|..||..|  |....|.::    ...|
Zfish   645 MPGQFEQTVVLNQLRYSGMLETVKIRRSGFPIRRTFKDFCSRYYVLMRALALSEDLK----GRSL 705

  Fly  1003 LFLRLKMEG---WALGKTKVFLRYYNDEFLARLYELQVKK------------------------V 1040
            |.|:|....   |.|||.|||:|...:..|.:..|.:|.|                        :
Zfish   706 LLLQLYDNSGAEWQLGKNKVFMRESLELRLEKQRETEVLKAASIIQAHILGYRARRQYRRLLLCI 770

  Fly  1041 IKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNE 1105
            :.:|...|||..|:|.:..:             .|...:||..||.|.|.....|:.||..:..|
Zfish   771 VVIQKNYRALYWRRRFQTMR-------------WATVTLQKRLRGQRARRLYVHLLEEKRKREEE 822

  Fly  1106 NTADFIRPFAKKWREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFERINM 1170
            .         ::.||:   |..|.....|..:...|:|......:......::.|:.|..|.|..
Zfish   823 E---------RRHREE---QEALERERHRLLELELLAQAAEEARRLEEKLKSEQTQVVFPETITP 875

  Fly  1171 REVNSSQLGPLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAF---PNQL--------LTQHM 1224
            ..:.:..     .|.|.:|   .:.|..:|..    |..:|.:.|   .||.        |.:.:
Zfish   876 DSITAED-----SPQKSIP---HESPIEETSL----AEQVSDEVFEAETNQASQVEEILRLEREI 928

  Fly  1225 EDDEPWDSPLQRNPSMTSCALTYNAYKK-------------EQACQT--------NWDRMGES-D 1267
            |.       |:|.......:||..:..:             |:||:.        |:|.:.|. .
Zfish   929 EG-------LRRQKEAQEQSLTTQSLHRLQRLRDQELRRLEEEACKAAQQFLTSLNFDEIDECVR 986

  Fly  1268 NIYN---------QGYFRDPQQLRRNQMQMNMNAYNNAYNSYNSNYNNQNWGVHRSGSRRNSLKG 1323
            ||.:         ||..|..:......:.::.:.:.::.|.....:::   |...||.|.:....
Zfish   987 NIESSLGGSGGSQQGSPRGEEDEVDEGLGVDEDGFKDSPNPSEHGHSD---GQRTSGIRTSDDSS 1048

  Fly  1324 ---------YAAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEGDNSED 1379
                     .|.||..|..|||  .||..|:.....|..                |..|.:....
Zfish  1049 EEDPYANDRVALPPVLPLIMPS--VYRAPPSSSGSTYSH----------------AVLEEETELI 1095

  Fly  1380 PPFNFKAMLRKTNYPRGSETNTYDFNNRRGSDSGDQH--TFQPPKLR------STGRRYQDDEGY 1436
            ||               .|.:.||      :|..|:.  ..:||.|.      |...|.......
Zfish  1096 PP---------------DEDSDYD------ADDYDEGGLIMRPPSLPPHNDIWSRENRSSLATSA 1139

  Fly  1437 NSSSGNYGVSRKFGQQQRAPTLRQSPASVGRSFEDS----NARSFEEAGSYVEEEIAPGITL 1494
            :.|||.|..|            ...|.|   |||||    :....::..||..:.:...:||
Zfish  1140 SVSSGAYRFS------------SDGPQS---SFEDSEDDFDRFDTDDESSYRRDSVYSCVTL 1186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 198/696 (28%)
myo10XP_005171458.2 None
Blue background indicates that the domain is not in the aligned region.

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