DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo10l1

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_001924041.3 Gene:myo10l1 / 566674 ZFINID:ZDB-GENE-080425-1 Length:2041 Species:Danio rerio


Alignment Length:1304 Identity:300/1304 - (23%)
Similarity:505/1304 - (38%) Gaps:335/1304 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 LFVDRGYVKRFDEKPEKMYP------EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLN 373
            :::.:..|.|  ||...|:.      ||::.|....:..|:.:|..|......|:.||.||.::|
Zfish    42 VYLQQAEVNR--EKVSAMHQSSIDGVEDMSTLAELHEAAIMHNLHQRYQKDNIYTNIGSILAAVN 104

  Fly   374 S-NEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARL 437
            . .:||..:.......|......|..||||::|:..|:.:....:.|.:::||||.:||:.:.:|
Zfish   105 PYKQIKGLYDLSAVELYSQHHLGELPPHIFAIANECYRCLWKRHDSQCVLISGESGAGKTESTKL 169

  Fly   438 LIKHLCYLGDGNRGA-----TGRVESSIKAILMLV----NAGTPVNNDSTRCVLQYCLTFGKTGK 493
            |::.|..:...:.|.     :.|||.:|.....::    ||.|..||:|:|......|.|.::|.
Zfish   170 LLQFLSVMSQNSAGTPPTEKSTRVEQAIVQSSPIMEAFGNAKTVYNNNSSRFGKFIQLHFSQSGN 234

  Fly   494 MSGAVFNMYMLEKLRVATTDGTQHNFHIFY-------------YF-------YDFINQQNQLKEY 538
            :.|.....|:|||.||...:..:.|:||||             ||       :.:::|...:|:.
Zfish   235 IQGGCIVDYLLEKNRVVRQNPGERNYHIFYALLAGASKSEKETYFLEDSPELFHYLSQSGCVKDR 299

  Fly   539 NLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENI---LRDIDFNHKQLETVRKVLAA 600
            :|                        ||.       :.|:::   |:.::|..:::..:.|:|:.
Zfish   300 SL------------------------DDK-------KLFDDVMEALKVMEFTEEEIRDMFKLLSG 333

  Fly   601 ILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARD 665
            :|.:||:.|...|. |::....:|:.::|||.:|..:....||...|:..|.......|.|:|.|
Zfish   334 VLQLGNVEFMTAGG-AQITTKQVVTNVSELLGLDCFQLSEVLTQRSMILRGEEICSPLTVEQAID 397

  Fly   666 ARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTN--AIIIHDMFGFECFNRNGLEQLMINTLN 728
            :||:||..|||:...:||.|||..:.      |..|  :|.|.|:||||.|..|..||..||..|
Zfish   398 SRDSVAMALYSQCFSWIIMRINQKIK------GKDNFKSIGILDIFGFENFEVNRFEQFNINYAN 456

  Fly   729 EQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDL- 792
            |::|.::|:.||..|.||...|.|....:::.||...|| |:.|..|:..::::.||..:..|. 
Zfish   457 EKLQEYFNKHIFSLEQLEYNREGIHWEAIDWMDNAECLD-LIEKKLGMLALVNEESRFPKGTDFT 520

  Fly   793 IMDRVSEKHS---QFVKKHTAT-EISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESI 853
            :::::..:||   .:||...|. :..:.||.|.::||.|...:.|||        |||   |:.:
Zfish   521 LLEKLHGRHSTNPYYVKPRLADHQFGIKHYAGEVLYDVRGILEKNRD--------TFR---DDIL 574

  Fly   854 MLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKM 918
            .::..::|....:|   ||.|..::..|       ||..|   ......|:::.||.:..:|:..
Zfish   575 NMLKDSRLDFIYDL---FEQVSSRNNEE-------TLKMG---TARKKPTVSSQFRDSLHSLMAT 626

  Fly   919 LSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQ 983
            ||.:   ...|||||:.:::..|..|..:||..|::..|:|:||..|:.||..|..|.:|..||:
Zfish   627 LSVS---NPFFVRCIKPNMDKTPNKFDPEVVLNQLRYSGMLETVKIRRAGFPVRRTFKDFFTRYK 688

  Fly   984 FLAFDFDEPV-----EMTKDNCRLLFL--RLKMEGWALGKTKVFL-------------------- 1021
            .:..:.::..     :..|.:..||.:  :.|.| |..|||||||                    
Zfish   689 IILKEKEKAAVASNGDDKKKSTDLLTIHDKTKKE-WQFGKTKVFLKETLEQKLEKQRDEVRSKAG 752

  Fly  1022 ---RYYNDEFLARL-YELQVKKVIKVQSMMRALLARKR------------------VKGGKVFKL 1064
               |.|...::||. ::..::.::.:|...|..|.|:|                  |..|...||
Zfish   753 LIIRAYLLRYIARKDFKKALESIVTIQKNYRTHLYRRRFQRKRSAALVLQKHRRGQVARGVCRKL 817

  Fly  1065 ---GKKGPEHHDVAASKIQKAFRGFR-------DRVRLPPLVNEKSGQLNENTADFIRPFAKKWR 1119
               .||..|.......:.:|...|.|       |....|..|.|.:.|:.|        ..:..|
Zfish   818 RDEKKKREEEERKKKEEQEKKTEGDREKKNEEEDEAESPRTVEEDTRQMEE--------ILRLER 874

  Fly  1120 EKSIFQVLLHYRAARFQDFVNL-----SQQVHIYNQRMVAGLNKCTRAVPFERINMREVNSSQLG 1179
            |..|.|       .:.:|.|:.     .|::.:.....|....|....|..|.:.:.:..    |
Zfish   875 EIEILQ-------KKREDSVSTLCESSKQELRLRRDAEVLRQKKAASRVATEFLELLDTG----G 928

  Fly  1180 PLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAFPNQLLTQ---HMEDD--------EPWDSP 1233
            |..:|                   .||..:.||.|...:....   |.|::        .|.:.|
Zfish   929 PEVIP-------------------GDPKQAASRSATATEEEVDEGFHAEEECIPLPEFPPPAEGP 974

  Fly  1234 LQRNPSMTSCALTYNAYKKEQACQTNWDRMGESDNIYNQGYFRDPQQLRRNQMQMNMNAYNNAYN 1298
            :.:....|                     :......:.:|..                       
Zfish   975 VDQEILAT---------------------LPPPPAAFAEGTV----------------------- 995

  Fly  1299 SYNSNYNNQNWGVHRSGSRRNSLKGYAAP--PPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSD 1361
                           :.|..|...|...|  ||||||:|..........::.:..::.......:
Zfish   996 ---------------APSAPNVPPGAPPPPSPPPPPPLPGETKKEEGKPEEAKTDKEVDGKKEGE 1045

  Fly  1362 PVRELQNMARNEG-DNSEDPPFNFKAMLRKTNYPRGSETNTYDFNNRRGSDSGDQHTFQPPKLRS 1425
            .|.....:...|. .::|:|.::..          |...:.||                      
Zfish  1046 DVDRTSRLTAAESLPDTEEPIYSVP----------GDGESDYD---------------------- 1078

  Fly  1426 TGRRYQDDEGYNSSSGNYGVSRKFGQQQRAPT-LRQSPASVGRSFEDSNARSFEEAGSYV--EEE 1487
                 |||    ...|...::...|:..|..| ...|..|..|| .||.|.|.:|...||  :||
Zfish  1079 -----QDD----LEDGQSSIAATDGEHARKSTCTNASQESYNRS-SDSYAESDDEHDGYVDTDEE 1133

  Fly  1488 IAPG 1491
            ::.|
Zfish  1134 VSNG 1137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
S_TKc 16..282 CDD:214567
MYSc 327..1034 CDD:214580 213/783 (27%)
MYSc_Myo21 346..1022 CDD:276848 203/745 (27%)
myo10l1XP_001924041.3 MYSc 63..745 CDD:214580 206/748 (28%)
MYSc_Myo10 77..733 CDD:276840 202/722 (28%)
MYO10_CC 862..911 CDD:293340 10/63 (16%)
PHA02664 <967..1139 CDD:177447 43/272 (16%)
PH-like 1153..>1184 CDD:302622
PH2_MyoX 1187..1288 CDD:270108
PH 1187..1280 CDD:278594
PH3_MyoX-like 1353..1478 CDD:270109
PH 1368..1468 CDD:278594
MyTH4 1561..1665 CDD:279165
B41 1676..1940 CDD:214604
FERM_M 1772..1940 CDD:278785
FERM_C_MyoX 1936..2024 CDD:270023
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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