DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo16

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_001920958.3 Gene:myo16 / 563752 ZFINID:ZDB-GENE-070912-470 Length:1910 Species:Danio rerio


Alignment Length:1807 Identity:406/1807 - (22%)
Similarity:665/1807 - (36%) Gaps:529/1807 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 DEIWFVMEYCAGGTAVDM--------VNKLLK-------LDRRMREEHIAYI-IRETCRAAIELN 137
            :::|..:.........||        ||.||:       ||.........|| ||......::::
Zfish   145 EDLWTALHVACACDHADMVLLLLLAGVNVLLQDVNGNIPLDYTTEGTETRYILIRHLEENGVDMS 209

  Fly   138 RNH--------VLHRDIRGDNILLTKNGRV-KLCDFGLS-RQVDSTLGKRGTCIGSPCWMAPEVV 192
            ..|        .:..|::.   |::..|.| :..|.|:: ..:.|..|.:            |||
Zfish   210 SVHQMKSQRCFTMMSDVKQ---LVSSGGSVNQQNDDGVTLLHIASASGYK------------EVV 259

  Fly   193 SAMESREPDITVR-ADVWALGITTIELADGKPPFADMHPTRAMFQIIRN-PPPTLMRPTNWSQQI 255
            |.:.....|:.|. :..|    |.:.||      |....|..:.|:::: ..|||:   |.:|  
Zfish   260 SVLLENGADVLVSDSSYW----TPLHLA------AKYGQTHIVSQLLKHKADPTLL---NCNQ-- 309

  Fly   256 NDFISESLEKNAENRPMMVEMVEHPFLTELI-------------------ENED---EMRSD--- 295
                         ::|..:...||  :.|::                   ::||   |...|   
Zfish   310 -------------DKPSDIAATEH--IAEMLLRAEEFWVQRQRDPSASPPQSEDHSAEANQDDNL 359

  Fly   296 ----IAEM-LELSRDVKTLYKEPELFVDRG----YVKRFDEKPEKMYP----------------- 334
                :|.| |.:||....|.|| .:|.|.|    .....|...:..||                 
Zfish   360 PVKKLATMALPISRRDSLLEKE-AMFRDSGGALTQQASLDNGLDGSYPSAAGKLEQVKLMPPAPN 423

  Fly   335 EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLN--------SNEIKQEFPQEFHAKYRF 391
            :|||:|....|.:::..::.|....:.|::||.|||.:|        ||.:.|     .:.....
Zfish   424 DDLASLSELTDSSLLYEMQKRFANDQIYTYIGHILLLINPYKDLPIYSNLVSQ-----LYLSSSG 483

  Fly   392 KSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRV 456
            :..|...|||||.|:.|:..|...:.||..::||||.||||...:.::|||.........|   :
Zfish   484 RLCSSLPPHIFSSAERAFHMMFQERRPQCFIISGESGSGKSVACKHILKHLAARSSPKGFA---L 545

  Fly   457 ESSIKAILMLV----NAGTPVNNDSTRCV----LQYCLTFGKTGKMSGAVFNMYMLEKLRVATTD 513
            |..:|.:.:::    :|.|.:|...:|.:    |||| ...|| .:.|.::. |||||.||....
Zfish   546 EPRMKHVNVILEAFGHAKTQMNTSGSRFIKLISLQYC-DKRKT-LLRGRLYT-YMLEKSRVICMP 607

  Fly   514 GTQHNFHIFYYFYDFIN--QQNQLKEYNLKADRNYRYLRVPPEVP--PSKLKYRRDDPEGNVERY 574
            ..|.||:|||...:.::  :::||...|:.|.|... ...|.|.|  .|.....|       |:.
Zfish   608 PHQQNFNIFYLMAEGLSAEEKSQLYLNNVLAHRCLN-TAAPGESPAVASACPQSR-------EKL 664

  Fly   575 REFENILRDIDFNHKQLETVRKVLAAILNIGNIRFR--QNGKYAEVENTDIVSRIAELLRVDEKK 637
            ...:..||.:.||..::|.|..:::|:|::|::||.  .:...|.|.:..::.|:|.:|:|..:.
Zfish   665 LALKQALRALGFNKLEVENVFVLISALLHLGDLRFTALTDADTAFVSDLQLLDRVAGMLQVSSED 729

  Fly   638 FMWSLTNFIM-VKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGD-T 700
            ...:||:.:. .||.:..|| :|.|.:...||.:...||.||...::|.||..:.......|| .
Zfish   730 LSSALTSDVQCFKGDVITRR-HTVEMSNHHRDLLTKALYGRLFSLLVNNINFYLQGHEETTGDPA 793

  Fly   701 NAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTA 765
            ..|.|.|:||||.|.||..|||.||.:||::.....:.:|..|..|...|.:....|....::||
Zfish   794 LEISILDIFGFEEFQRNAYEQLCINMVNERIHQFTAEVLFQQEQHECLQEGVAMETLRSLGSQTA 858

  Fly   766 -LDNLLTKPDGLFYIIDDASRSCQDQDLIM-------------DRVS----EKHSQFVKKHTATE 812
             ||....||.|:..|||:.|:|.:..::.:             |.||    :.:.....|.....
Zfish   859 VLDFFFQKPQGVLCIIDEESQSLRPCEVNLYKRLQIQLDSSATDAVSLTTKDGNGNPPPKDQGPS 923

  Fly   813 ISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNL---------- 867
            .:|.|:.|::.||.....|.|:|.:|..::...::|.:..|..||..:||:.|:|          
Zfish   924 FTVTHFAGKMTYDLTGSLDRNKDVLPQNILFVMKTSENVLIHQMFQCKLTQTGSLVPQHQRMKLR 988

  Fly   868 ----TMPFEAVQHKDESERKSYA-LNTL--SAGCISQVNNLR-----TLAANFRFTCLTLLKMLS 920
                |:..::.......:.|.|. ||.|  ..|..|.:..|.     |:|...:   .:|.::.|
Zfish   989 GPKGTLINKSTTLNPARDAKKYVELNKLLKKKGASSFLQRLERCGPITVAVQLK---NSLCEITS 1050

  Fly   921 QNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFL 985
            :..:...||::|:|.:...||..|.|..|..|::.:|||:.|...:.|:..||.|..||.||:.|
Zfish  1051 KLQSCTPHFIQCVRPNNASKPDVFDSFHVSSQLQYVGVLEMVRMIRYGYPVRLSFSSFLSRYREL 1115

  Fly   986 AFDF--DEPVEMTKDNCRLLFLRLKMEGWALGKTKVFLRYYN-DEFLARLYELQVKKVIKVQSMM 1047
            ....  |.....|::.||.:.|..|::||.:|.:||||||:. |....|.::|. :|:|..|.:|
Zfish  1116 VDTIITDRKKATTEEKCRHILLHCKLQGWQMGNSKVFLRYWQADHLNDRCHQLH-RKIIICQKVM 1179

  Fly  1048 RALLARKRVKGGKVFKLGKKGPEHHDVA---------------------ASKIQKAFRGFRDRVR 1091
            |..|||::|:.    :|..:..|..:|.                     |:.|.:.....|..:.
Zfish  1180 RGWLARQQVRR----RLTSRKQELCNVQRFLQGAEDLGLRTYDNLVIQNAADIARENDRLRGHIS 1240

  Fly  1092 LPPL----------------VNEKSGQLNENTADFIRPFAKKWREKSIFQVLLHYRAARFQDFVN 1140
            .|||                |.||||:.|:        .|.:...:.|    .|:|::.....:.
Zfish  1241 APPLGERPEPVGKEEDSPKRVVEKSGRGND--------VANRGGNRPI----RHFRSSSVPLPLV 1293

  Fly  1141 LSQQVHIYNQRMVAGLNKCTRAVPF--ERINMREVNSSQLGPLPVPIKKMPFRLDQIPFYD---- 1199
            :...||   ..:.|.:....:..|.  :..|...::|.:..|.|.|.:....||.  ..|:    
Zfish  1294 MDSLVH---SSIGASIKAALQPTPHSTDEGNGGSLSSPRKQPPPKPKRDPNTRLS--ASYEAVSA 1353

  Fly  1200 -----------------------TQYMVDPANSISR-------------------QAFPNQLLTQ 1222
                                   ||  :.|::|:::                   :..||..||.
Zfish  1354 GLSIAPKDSPAEGQASPSGSPPNTQ--LSPSDSLAKPRPHSDDYSTMKKIPPPKPKRSPNTKLTG 1416

  Fly  1223 HMED------DEPWDSPL-------------QRNPSM----TSCALTYNAYKKEQA--------- 1255
            ..|:      ..|.|..|             ||..|.    :|....|....:|..         
Zfish  1417 SYEEISVPSPARPTDMKLVSLVRGGHCLGLIQRAASADGPHSSVLSLYPCQDEEDVYIEMVGASR 1481

  Fly  1256 ----CQTNWDRMGESDNIYNQ-GYFRDPQ------------------------------------ 1279
                ..|:....||:  :|.: .||.:.:                                    
Zfish  1482 ALSLADTHSPEPGEA--VYEEMKYFPNDEIVSTPVVKPEAVNPTPLPAPVLEIKRPVTLIEQSGT 1544

  Fly  1280 ----QLRRNQMQMNMNA-YNNAYN-----------------------------------SYNSNY 1304
                |..::.|..::.| :.|...                                   ..|.||
Zfish  1545 LGGKQQGKDGMPCDIPAPFPNLLPHRPPLLVFPPSPVTCSPASDESPLTPLEVKKLPVFETNLNY 1609

  Fly  1305 NNQNWGVHRS----GSRRNSLKGYA-----------APPPPPPP-------MPSSNYYRNNPNQQ 1347
            ::|:.|...|    ..|.:|....:           .|||||||       .|.|::    |...
Zfish  1610 SSQDGGSPLSPQYTRQRADSSPSLSILMPDKSTPPLTPPPPPPPAVLPPPYRPPSHF----PFPP 1670

  Fly  1348 QRNY----------------------------QQRSSYPPSDPVRELQNMARNEGDNSEDP---- 1380
            :.|:                            ...||.||..||:..:...|.....|..|    
Zfish  1671 EPNFLALTRAASVASTESPKVSHKMGHGLAETPPSSSKPPFSPVKTSRPEPRRAHSCSSSPLLFN 1735

  Fly  1381 PFNFKAMLRKTNYPRGSETNTYDFNNRRGSDSGDQHTFQPPKLR--STGRRYQDDEGYNSSSGNY 1443
            |.|.:.:....:     |.||. |::.|.            .||  :|||:.: |.|.::|:.|.
Zfish  1736 PANGRPLTSPLD-----ELNTI-FSSGRS------------LLRKSTTGRKIR-DSGLSNSNINL 1781

  Fly  1444 GVSRKFGQQQRAPTLRQSPASVGRSFEDSNARSFEEAGSYVEEEIAPGITLS 1495
            .     |::.      |.|.|.....:|.||.:.....|.....|..|..:|
Zfish  1782 P-----GRED------QGPISPSAQLQDKNANNHTSPNSSNPAPIENGNQIS 1822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 43/220 (20%)
S_TKc 16..282 CDD:214567 43/220 (20%)
MYSc 327..1034 CDD:214580 222/790 (28%)
MYSc_Myo21 346..1022 CDD:276848 210/741 (28%)
myo16XP_001920958.3 ANK 88..186 CDD:238125 8/40 (20%)
Ank_2 90..177 CDD:289560 7/31 (23%)
ANK repeat 113..144 CDD:293786
Ank_2 118..273 CDD:289560 28/142 (20%)
ANK 141..296 CDD:238125 35/175 (20%)
ANK repeat 146..207 CDD:293786 13/60 (22%)
ANK repeat 242..273 CDD:293786 9/42 (21%)
Ank_2 247..329 CDD:289560 24/123 (20%)
ANK repeat 275..306 CDD:293786 10/43 (23%)
MYSc 424..1164 CDD:214580 219/762 (29%)
Motor_domain 435..1154 CDD:277568 210/741 (28%)
NYAP_N 1252..1641 CDD:292079 58/409 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25137at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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