DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo5aa

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_068071029.2 Gene:myo5aa / 562188 ZFINID:ZDB-GENE-041027-2 Length:1892 Species:Danio rerio


Alignment Length:1295 Identity:277/1295 - (21%)
Similarity:509/1295 - (39%) Gaps:259/1295 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LELSRDVKT----LYKEPELFVDRGYVKRFDEKPEKMYPEDLAALENPVDENIIESLRHRILMGE 360
            ||...|.||    ..:.|::.|..               .||.||....:..::.:|:.|.:..:
Zfish    50 LEFKLDPKTNNLPHLRNPDILVGE---------------NDLTALSYLHEPAVLHNLKVRFIDSK 99

  Fly   361 -SYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLS 424
             .|::.|.:|:::|..|....:..:....|..::..:..||||:||:.||:.|...:..|.|::|
Zfish   100 LIYTYCGIVLVAINPYETLPIYGADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVS 164

  Fly   425 GESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKA----ILMLVNAGTPVNNDSTRCVLQYC 485
            |||.:||:.:|:..:::...:  ....:...||..:.|    :..:.||.|..|::|:|......
Zfish   165 GESGAGKTVSAKYAMRYFATV--SGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIE 227

  Fly   486 LTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLR 550
            :.|.|...:.||....|:|||.||......:.|:||||......:.. :.|...|....::.|  
Zfish   228 IGFDKKYHIIGANMRTYLLEKSRVVFQADEERNYHIFYQLCASAHLP-EFKALKLGKANDFHY-- 289

  Fly   551 VPPEVPPSKLKYRRDDPEGNVERYREF---ENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQN 612
                     .|..|:.....|:..:|.   .|....:..|......:.::||:||::||:..:..
Zfish   290 ---------TKQGRNPVIDGVDDAKEMSTTRNAFILLGINESYQMGLFQILASILHLGNVDVKDR 345

  Fly   613 GKYAEV--ENTDIVSRIAELLRVD---------EKKFMWSLTNFIMVKGGIAERRQYTTEEARDA 666
            ...:.:  .|...:|...||:.|.         .||...:...:|         :.....:|.:|
Zfish   346 DSDSSIIPPNNGHLSVFCELMGVTYQDMSHWLCHKKLKTATETYI---------KPIPKLQAINA 401

  Fly   667 RDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQM 731
            |||:|..:|::|.::|::.:|..:   .:.....:.|.:.|::|||.|..|..||..||..||::
Zfish   402 RDALAKHIYAKLFNWIVDHVNKAL---HSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKL 463

  Fly   732 QYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDLIMDR 796
            |..:|..:|..|..|...|.|....::||||:..: ||:....|:..::|:..:..:..|   |.
Zfish   464 QQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCI-NLIEAKMGILDLLDEECKMPKGSD---DS 524

  Fly   797 VSEK----H----SQFVKKHTATE-ISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDES 852
            .::|    |    :.|.|...:.: ..:.|:..::.|....|.:.|:|.|..|.|...::|..:.
Zfish   525 WAQKLYNTHLKTCALFEKPRMSNKAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFDL 589

  Fly   853 IMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVN--NLRTLAANFRFTCLTL 915
            ::.:|.:: .||   |.|..|........|.|...:   .|..||.:  :.:|:...||.:...|
Zfish   590 LVELFHDE-EKA---TSPTGAAPGPGGRTRLSVKPD---KGKSSQASKEHKKTVGLQFRNSLQLL 647

  Fly   916 LKMLSQNANLGVHFVRCIRADLEYKPR-SFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFL 979
            ::.|:...   .|:||||:.: :||.. :|......||::|.|||:|:.....||.||..:.||.
Zfish   648 METLNATT---PHYVRCIKPN-DYKHAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFF 708

  Fly   980 RRYQFLAFDFDEPVEMTKDNCRLLFLRLKM--EGWALGKTKVFLRYYNDEFLARLYELQVKKV-I 1041
            .||:.|....|...: .|..|:.:..:|..  :.:..||||:|.|.....:|.:|...:::.. |
Zfish   709 SRYRVLMKQKDVLTD-KKMTCKNVLEKLVQDPDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACI 772

  Fly  1042 KVQSMMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNEN 1106
            ::|..:|..||||     |..::     :|   ||:.||:..||::.|.....|...::      
Zfish   773 RIQKTIRCWLARK-----KYLRM-----KH---AATTIQRFVRGYQARCLAKFLRRTRA------ 818

  Fly  1107 TADFIRPFAKKWREKSIFQ-----------VLLHYRAARFQDFVNLSQQVHIYNQRMVAG----- 1155
             |..|:.:.:.:.:|:.::           :|..|.|.:....: |.:...:..|:||.|     
Zfish   819 -AIIIQKYQRMYIQKTCYKRKQAAALAMQCILRAYMARQLYKAL-LREHKAVIIQKMVRGWLARQ 881

  Fly  1156 -LNKCTRAVPFERINMREVNSSQLGPLPVPIKKMPFRLDQIPFY------------DTQYMVDPA 1207
             ..:..:|:.:.:..:|.:.:.:      .:||:......:..:            ..|..:|..
Zfish   882 WFKRSLKAIVYLQCCIRRMRAKR------ELKKLKIEARSVEHFKKLNIGMENKIMQLQRRIDDQ 940

  Fly  1208 NSISRQAFP--NQLLTQHMEDDEPWDSPLQR----------NPSMTSCAL---------TYNAYK 1251
            |..:|....  |.|.|.|..:.|...:.:.|          |.:..:..|         ..|..|
Zfish   941 NKENRSMSERLNTLETSHAVESERMRAEVTRLRGAEEDAKNNANKVTSLLEELERLRKDLQNTQK 1005

  Fly  1252 KEQA----CQTNWDRMGESDNIYNQGYFRDPQQLRRNQMQMNMNAYNNAYNSYNSNYN------N 1306
            :::|    .||..|.|                    .:|...:...|....:..:|.|      :
Zfish  1006 EKKAIEDWAQTYQDEM--------------------EKMISELKEQNQLLKTEKNNLNQLIQEQS 1050

  Fly  1307 QNWGVHRSGSRRNSLKGYAAPPPPPPPMPSSNYYRNNPNQQQRNYQQ--------RSSYPPSDPV 1363
            |.|    :...:.:||            ..:....|:.|:::..||.        ...|   |.:
Zfish  1051 QQW----TDKMQRALK------------EETQQLENDLNEERSRYQNLLTEHLRLEEKY---DDL 1096

  Fly  1364 RELQNMARNEGDNSEDPPFNFKAMLRKTNYPRGSETNTYDFNNR-RGSDSGDQHTFQPPKLRSTG 1427
            :|...:|.|..          |...|:|:....|..:...:|:. ..|:.|.:            
Zfish  1097 KEEITLAVNVP----------KPGHRRTDSTHSSNESECTYNSEFAESEEGSR------------ 1139

  Fly  1428 RRYQDDEGYNSSSGNYGVSRKFGQQQRAPTLRQSPASVGRSFEDSNARSFEEAGSYVEEE 1487
                  .|.:.|.....:|.....|:|...|.|...|:.... |.....|:.|.:..:||
Zfish  1140 ------VGEDVSKSILDMSLFLKLQKRVSELEQEKQSLQNEL-DRREEQFQRARARDDEE 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 175/708 (25%)
myo5aaXP_068071029.2 None
Blue background indicates that the domain is not in the aligned region.

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