DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and si:zfos-2326c3.2

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_009306038.1 Gene:si:zfos-2326c3.2 / 561669 ZFINID:ZDB-GENE-091113-25 Length:1165 Species:Danio rerio


Alignment Length:459 Identity:145/459 - (31%)
Similarity:226/459 - (49%) Gaps:77/459 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AQLPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVSIEEEYRTLRDYCDHP 71
            |.|.||...||:.|.:..|...:|::.:.:...::.|:|:....|:.:..|:.|...|:.:..|.
Zfish    16 ASLRDPAGIFELIEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEDEIKLEINMLKTHSHHR 80

  Fly    72 NLPEFYGVYKLSKPNG-PDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIE 135
            |:..:||.:....|.| .|::|.|||||..|:..|::.|  .....::|:.|||:.||..|..:.
Zfish    81 NIATYYGAFVKKSPAGQDDQLWLVMEYCGAGSVTDLLKK--TKGNCLKEDWIAYVCREVLRGLLH 143

  Fly   136 LNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREP 200
            |:.:||:||||:|.|:|||:|..:||.|||:|.|:|.|:|:|.|.||:|.||||||::..|:.:.
Zfish   144 LHSHHVIHRDIKGQNVLLTENAEIKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDENPDS 208

  Fly   201 DITVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISESLEK 265
            ....|:|||:||||.:|:|:|.||..||||.||:|.|.|||||.| :...||::...|:...|.|
Zfish   209 TYDYRSDVWSLGITALEMAEGVPPLCDMHPMRALFLIPRNPPPKL-KSKKWSKKFQTFVDSCLVK 272

  Fly   266 NAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPE 330
            |..:||....::.|.|:.:| .||.::|..:.:.|:.:|                  ||..||..
Zfish   273 NYLHRPSTETLLRHSFIKDL-PNERQVRITLKDHLDRTR------------------KRRQEKDG 318

  Fly   331 KMYPEDLAALENPVDENIIESLRHRILMGESYSFI---GDILLSLNSNEIKQE------------ 380
            |.|  :.:..|:. |:.|.|.      .||..|.:   |:.:|......::||            
Zfish   319 KEY--EYSGSEDE-DDGINEE------EGEPSSIVNLPGESMLRREFLRLQQETNSQTQLIQQVH 374

  Fly   381 ----------------FPQEFHAKYRFKSRSENQPHIFSVADIAYQDML--------------HH 415
                            ..|:...:.||:...|...|...|.....|:||              |.
Zfish   375 NQDNYKKQLLADRQKRIQQQQEERRRFEDHQERLLHETGVQWPELQEMLWQEETDLTEKSKRNHK 439

  Fly   416 KEPQ 419
            |:|:
Zfish   440 KQPK 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 108/273 (40%)
S_TKc 16..282 CDD:214567 105/266 (39%)
MYSc 327..1034 CDD:214580 27/138 (20%)
MYSc_Myo21 346..1022 CDD:276848 21/119 (18%)
si:zfos-2326c3.2XP_009306038.1 PKc_like 9..289 CDD:304357 109/275 (40%)
S_TKc 25..289 CDD:214567 105/266 (39%)
CNH 847..1143 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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