DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo9b

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_005171391.1 Gene:myo9b / 560956 ZFINID:ZDB-GENE-030131-938 Length:1974 Species:Danio rerio


Alignment Length:1587 Identity:352/1587 - (22%)
Similarity:603/1587 - (37%) Gaps:457/1587 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 NGRVKLC--DFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREPDITVRADVWALGITTIEL 218
            ||:..:|  :...:.|:...|..:.   |..|.:          |.|.....|.|....:||:.|
Zfish     5 NGKATICQDESVCALQIYPRLSAKP---GQDCIL----------RVPKEATAATVIKTALTTLGL 56

  Fly   219 ADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISESLEKNAENRPMM-------VEM 276
            ...||                          :...::.::..|.....|.:.|:.       ...
Zfish    57 DTSKP--------------------------HVLVEVQEYGGEEWVLQASDLPVQRVLLWPRKAQ 95

  Fly   277 VEHP------FLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPEKMYPE 335
            ::||      |..:....:..|..||  |..:.|:     |..:..|.||:|   .::|::.  :
Zfish    96 LKHPQSDGYFFALQEGSYDRSMHYDI--MSSVRRE-----KVAQGLVTRGFV---SQQPQEY--D 148

  Fly   336 DLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPH 400
            ||..|.:..:|:|:|:||||....:.|:|..:||:::|..:....:...:...|...:..:.:||
Zfish   149 DLCNLPDLTEESILETLRHRFHKQKIYTFASNILIAVNPFKFLPIYNPRYVKMYENHTLGKLEPH 213

  Fly   401 IFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSI----K 461
            :|::||.|:..|::.:..|.||:||||.|||:.:...||.  |......:|.|..||.:|    .
Zfish   214 VFAIADAAFHTMMNKRVNQCIVISGESGSGKTQSTNFLIH--CLTALSQKGYTSGVERTILGAGP 276

  Fly   462 AILMLVNAGTPVNNDSTRCVLQYCLTFGK--------TGKMSGAVFNMYMLEKLRVATTDGTQHN 518
            .:....||.|..||:|:|        |||        :|.:.|||...|:|||.|:.:...|:.|
Zfish   277 VLEAFGNAKTAYNNNSSR--------FGKFIQVNYLESGVVRGAVVEKYLLEKCRLVSRGKTERN 333

  Fly   519 FHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRD 583
            :|:|||.....:::.: .|:.|....:|.||:  .|:|.|      :|.......:|.....:..
Zfish   334 YHVFYYLLIGASEEER-DEFKLLQPNDYHYLK--EEMPIS------EDQAEMTHEFRRLHQAMEM 389

  Fly   584 IDFNHKQLETVRKVLAAILNIGNIRFRQN--GKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFI 646
            :.|.....:.:..||:|||.:||:.::..  |:..:|....::|.:::||:|..:..:.:||...
Zfish   390 VGFLPPTKKQIFSVLSAILYLGNVTYKPKDVGEGLKVGPDHVLSALSDLLKVKVELLVEALTTRK 454

  Fly   647 MVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRIN--------MNMSFPRAVFGDTNAI 703
            .:.........|:..||..|||::|.:|||.|.|:|:.|||        :..|.|....|     
Zfish   455 AMTANDKLILPYSLNEAITARDSMAKSLYSALFDWIVLRINHALLNKRDLEDSVPCLSIG----- 514

  Fly   704 IIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDN 768
             :.|:||||.|..|..||..||..|||:||:.|||||..|..|..||.|....::|.||...:..
Zfish   515 -VLDIFGFEDFKTNSFEQFCINYANEQLQYYCNQRIFTLEQEEYLAEGITWHTVDFPDNIGCISL 578

  Fly   769 LLTKPDGLFYIIDDASRSCQDQD-LIMDRVSEKHSQ---FVKKHTATEIS-----VAHYTGRIIY 824
            ...||.|||:::|:.|...|..| .::::..::|..   ||:    |.:.     :.|:.|::.|
Zfish   579 FSKKPTGLFFLLDEESNFPQATDSTLLEKFKQQHQDNPFFVQ----TPVREPAFVILHFAGKVKY 639

  Fly   825 DTRAFTDINRDFVPPEMIETFRSS---------------------LDESIMLMFTNQLTKAGNL- 867
            ..:.|.:.|.|.:.|:::...|||                     |..:|..:..  ..|||.. 
Zfish   640 QIKDFREKNTDHMRPDIVALLRSSECSYLRQLIGANPVAVFRWGILRATIRTLAV--FNKAGRTW 702

  Fly   868 ------------------------TMP-----------------------------FEAVQHKDE 879
                                    |:|                             |...:.|.|
Zfish   703 AEKHPDEIRRYSRRSFGESRRPSPTVPTIQRLKSQSRIDFSFDRSEEDPLEAFEDIFATFESKKE 767

  Fly   880 -------------------------SERK-----------------------SYALNTLSAGCIS 896
                                     |.||                       |::|..:.|  ::
Zfish   768 LHAKVLRSLRQFGVEVPQKLRLSTNSSRKYRLFSQKNRPNKHKQLIPKNLIDSHSLKFIMA--LT 830

  Fly   897 QVNNLR-------------TLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHSDV 948
            |.|.:.             :::|.|:   .:|.|:|.........||||||::.:.:...|...:
Zfish   831 QHNRVTRSLLHLHTKKKPPSISAQFQ---ASLSKLLETLRKAEPFFVRCIRSNGDKREMHFDDAL 892

  Fly   949 VQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEMTKDNCRLLFLRLKMEG-- 1011
            |.||::..|:|.||..|:.|:.::..|.||:.:::.|   ..:.:...:::...|..::.:.|  
Zfish   893 VLQQLRYTGMLQTVRIRRSGYGAKFTFREFIDQFRVL---LPKEISTPQEDITNLLTKMGLPGSS 954

  Fly  1012 WALGKTKVFLRYYNDEFLAR-LYELQVKKVIKVQSMMRALLARKRVKGGKVFKLGKKG------- 1068
            :.:|:|||||:....:.|.. |::..::::|.:|...||.|.||:      :..|:||       
Zfish   955 FQIGQTKVFLKESERQILQETLHKEVMRRIIILQRWFRACLMRKQ------YLRGRKGIITIQRS 1013

  Fly  1069 -----PEHHDVAASKIQKAFRGFRDRVR--------------------------LPPLVNEKSGQ 1102
                 ..:...||..||.|:|..|.|..                          ||.|.||....
Zfish  1014 WRYVRETYRCRAAIVIQIAWRKSRQRAEQEKLKAQAFQRDLNKIEEKKPSQPKPLPSLPNESRTA 1078

  Fly  1103 LNENTADFIRPFAKKWREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFER 1167
            .::.| |..||......:..|          ..|....:::|:.:...|    |.:..|.:    
Zfish  1079 ESKKT-DEPRPQLNTDTKPKI----------PTQPTPGITKQLSVKEDR----LGRSNRGM---- 1124

  Fly  1168 INMREVNSSQLGPLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAFPNQLLTQHMEDDEPWDS 1232
            :..:|.:.|..| ||.|: .:|..:.|..:.|:|:.|    .:.||...|:|    .|..|.|  
Zfish  1125 VGNKERHPSPSG-LPRPV-SLPLNMSQSAYNDSQHTV----QLQRQNKSNRL----TEKPEKW-- 1177

  Fly  1233 PLQRNPSMTSCALTYNAYKKEQACQTNWDRMGESDNIYNQ-----GYFRDPQQLRRNQMQMNMNA 1292
                               ||::  ::..|||..|.|..:     |:.:....|..:.:....::
Zfish  1178 -------------------KERS--SDAARMGNIDEIKPRSHEKIGFLKPGISLSLDNVSRMSSS 1221

  Fly  1293 YNNAYNSYNSN---YNNQNWGVH-------RSGSRRNSL-----KGYAAPPPPPPPMPSSNYYRN 1342
            .:::..|.:.|   ..|:....|       |||.:.:.|     ..::.|.||..|..       
Zfish  1222 ESDSSASSSRNEVMVENRKRLKHKRRLARPRSGLKVDDLDLSDSAYWSFPLPPISPAA------- 1279

  Fly  1343 NPNQ----------QQRNYQQRSSYP-----PSDPVRELQNMARNEGDNSEDPPFNFKAMLRKTN 1392
             |||          .|.:.:....:|     ||:.|.........:|         |....:|.:
Zfish  1280 -PNQSITQVVVEAVMQSSVESDGCFPFSNRSPSEEVIAPSITPERKG---------FLKFFKKRS 1334

  Fly  1393 YPR-GSETNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDEGYNSSSGNY-GVSRKFGQQQRA 1455
            .|: |:.|.......:....||: |:..|               ...:||.| |..|.       
Zfish  1335 TPQDGTITMVKTLAEKEELASGN-HSNSP---------------RTKNSGTYPGAHRN------- 1376

  Fly  1456 PTLR---------QSPASVGRSFEDSN 1473
            ||::         |..||:.|...|:|
Zfish  1377 PTIKISRATRTQVQWNASLDREITDTN 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 21/140 (15%)
S_TKc 16..282 CDD:214567 21/140 (15%)
MYSc 327..1034 CDD:214580 217/876 (25%)
MYSc_Myo21 346..1022 CDD:276848 210/844 (25%)
myo9bXP_005171391.1 UBQ 13..110 CDD:294102 19/135 (14%)
MYSc 147..974 CDD:214580 215/867 (25%)
MYSc_Myo9 159..965 CDD:276836 210/844 (25%)
C1 1529..1577 CDD:237996
RhoGAP 1593..1778 CDD:295372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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