DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYO5C

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_061198.2 Gene:MYO5C / 55930 HGNCID:7604 Length:1742 Species:Homo sapiens


Alignment Length:1101 Identity:269/1101 - (24%)
Similarity:468/1101 - (42%) Gaps:183/1101 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 DIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPEKMYPEDLAALENP---VDENIIESLRH-- 354
            ::.:..|:::|.:...|...|.::.|     .|....:.||.|..|.||   |.||.:.:|.:  
Human    20 EVWKSAEIAKDYRVGDKVLRLLLEDG-----TELDYSVNPESLPPLRNPDILVGENDLTALSYLH 79

  Fly   355 --------RILMGES---YSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIA 408
                    ||...||   |::.|.||:::|..:....:.......|..::..:..||||:||:.|
Human    80 EPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEA 144

  Fly   409 YQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKAILMLV----NA 469
            |:.|..:...|.|::||||.:||:.:||..:::...:  ...|:...||..:.|...:.    ||
Human   145 YKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATV--SKSGSNAHVEDKVLASNPITEAVGNA 207

  Fly   470 GTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQ 534
            .|..|::|:|......::|.:..::.||..:.|:|||.||......:.|:||||...... ||::
Human   208 KTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVVFQSENERNYHIFYQLCASA-QQSE 271

  Fly   535 LKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLA 599
            .|...|.:...:.|.|:........:..|.:    .||..:.|..:....||   |:: |.|:||
Human   272 FKHLKLGSAEEFNYTRMGGNTVIEGVNDRAE----MVETQKTFTLLGFKEDF---QMD-VFKILA 328

  Fly   600 AILNIGNIRFRQ--NGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEE 662
            |||::||::...  |.:.:..|:...:....|||.::..:....|.|..:|.......:..|..:
Human   329 AILHLGNVQITAVGNERSSVSEDDSHLKVFCELLGLESGRVAQWLCNRKIVTSSETVVKPMTRPQ 393

  Fly   663 ARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAII-IHDMFGFECFNRNGLEQLMINT 726
            |.:||||:|..:|:.|.|||:.|||..:.|.    |..:..| :.|::|||.|:.|..||..||.
Human   394 AVNARDALAKKIYAHLFDFIVERINQALQFS----GKQHTFIGVLDIYGFETFDVNSFEQFCINY 454

  Fly   727 LNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSC---- 787
            .||::|..:|..:|..|..|...|||....::||||:..:| |:....|:..::|:   .|    
Human   455 ANEKLQQQFNMHVFKLEQEEYMKEDIPWTLIDFYDNQPVID-LIEAKMGILELLDE---ECLLPH 515

  Fly   788 -QDQDLIMDRVSEKHSQFVKKH--------TATEISVAHYTGRIIYDTRAFTDINRDFVPPEMIE 843
             .|::.:    .:.::.||.::        :.|...:.|:..::.|....|.:.|||.|...::|
Human   516 GTDENWL----QKLYNNFVNRNPLFEKPRMSNTSFVIQHFADKVEYKCEGFLEKNRDTVYDMLVE 576

  Fly   844 TFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVNNLR---TLA 905
            ..|:|........|....|...    ||.::            :...||..:.:.|:..   |:.
Human   577 ILRASKFHLCANFFQENPTPPS----PFGSM------------ITVKSAKQVIKPNSKHFRTTVG 625

  Fly   906 ANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFS 970
            :.||.:...|::.|:...   .|:||||:.:.|..|..|.|..:.||::|.|||:|:....:.:.
Human   626 SKFRSSLYLLMETLNATT---PHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYP 687

  Fly   971 SRLPFDEFLRRYQFLAFDFDEPVEMTKDNCRLLFLRLKMEG--WALGKTKVFLRYYNDEFLARLY 1033
            ||..:.||..||..|....:......|:.|:::..||..:.  :..||||:|.|...   :|.|.
Human   688 SRWTYIEFYSRYGILMTKQELSFSDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQ---VAYLE 749

  Fly  1034 ELQVKKV----IKVQSMMRALLARKRV----KGGKVFKLGKKGPE-----------HHDVAASKI 1079
            :|::.|:    :.||..||..|.||:.    :...:.:...:|.:           ....||..|
Human   750 KLRLDKLRQSCVMVQKHMRGWLQRKKFLRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIII 814

  Fly  1080 QKAFRGFRDR-----VRLPPLVNEKSGQ-----------LNENTADFIRPFAKKWREKSIFQ--- 1125
            ||..||:..|     :|:..:..:...:           |.|:.|..::.:|:.|..:..||   
Human   815 QKHCRGYLVRSLYQLIRMATITMQAYSRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIR 879

  Fly  1126 -----VLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNK--CTRAVPFERINMREVNSSQLGPLPV 1183
                 :.|.||..|.|.  .|..| :..|..:|..|..  ..||...|:                
Human   880 RFVLNIQLTYRVQRLQK--KLEDQ-NKENHGLVEKLTSLAALRAGDVEK---------------- 925

  Fly  1184 PIKKMPFRLDQIPFYDTQYMVDPANSISRQAFPNQL--LTQHMEDDEPWDSPLQRNPSMTSCALT 1246
             |:|:...|::...:...|  :......|.|...:|  |.:|..:.|.....:|           
Human   926 -IQKLEAELEKAATHRRNY--EEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQ----------- 976

  Fly  1247 YNAYKKEQACQTNWDRMGESDNIYNQGYFRDPQQLRRNQMQMNMNAYNNAYNSYNSNYNNQ 1307
               .|.::..:...::|   ||:..| .|.|.|:..|.:|.:     ..::.....:|..|
Human   977 ---LKLQEKTEELKEKM---DNLTKQ-LFDDVQKEERQRMLL-----EKSFELKTQDYEKQ 1025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 191/713 (27%)
MYO5CNP_061198.2 MYSc_Myo5 81..741 CDD:276831 188/701 (27%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 632..654 7/24 (29%)
IQ 810..828 CDD:197470 8/17 (47%)
IQ 831..851 CDD:459869 1/19 (5%)
SMC_prok_B <886..>1356 CDD:274008 36/185 (19%)
Myo5c_CBD 1369..1736 CDD:271260
Blue background indicates that the domain is not in the aligned region.

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