DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo1ea

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_005168983.2 Gene:myo1ea / 555285 ZFINID:ZDB-GENE-030131-5127 Length:1117 Species:Danio rerio


Alignment Length:1193 Identity:284/1193 - (23%)
Similarity:491/1193 - (41%) Gaps:223/1193 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQP 399
            :|:..|....::.|:|:|:.|.:....:::||.:|:|:|..:....|.::....|:..::.||.|
Zfish    22 DDMVLLSKINEDAIVENLKKRYMDDYIFTYIGPVLISVNPFKQMPYFGEKEIEMYQGAAQYENPP 86

  Fly   400 HIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKAIL 464
            ||:::||..|::|:..:|.|.:::||||.:||:..|:.::.::..:..|.    .||: .:|.|:
Zfish    87 HIYALADNMYRNMMIDRENQCVIISGESGAGKTVAAKYIMGYISKVSGGG----PRVQ-HVKDII 146

  Fly   465 M--------LVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHI 521
            :        ..||.|..||:|:|....:.:.|...|:..|...:.::|||.||...:..:.:|||
Zfish   147 LQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSSGGEPDGGKISNFLLEKSRVVMRNPGERSFHI 211

  Fly   522 FYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDID- 585
            ||...:..: .:|.....:.:...|.||.       ....|:.||    :....:|:..|..:| 
Zfish   212 FYQLIEGAS-GDQKSSLGITSLDYYTYLN-------QSGSYKVDD----INDKHDFQETLHAMDV 264

  Fly   586 --FNHKQLETVRKVLAAILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIM- 647
              .:......|.:::|.||::|||.||:.|.||.|||.:.::..|.||.:|:::....||:..| 
Zfish   265 IGISGIDRTMVLQIVAGILHLGNINFREAGNYAAVENDEFLAFPAFLLGIDQERLKEKLTSRKMD 329

  Fly   648 -VKGGIAERRQYT--TEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIHDMF 709
             ..||.:|....|  .|:|...|||::..|:||:.|:::..||..|........    |.:.|::
Zfish   330 GKWGGKSESIDVTLNVEQACFTRDALSKALHSRVFDYLVESINKAMVKEHQELN----IGVLDIY 390

  Fly   710 GFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTK-- 772
            |||.|.:||.||..||.:||::|..:.:....:|..|...|.|....:.:::||...|.:.:|  
Zfish   391 GFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQDEYVQEGIRWTQIEYFNNKIVCDLIESKIN 455

  Fly   773 PDGLFYIIDD------ASRSCQDQDLIMD-RVS-EKHSQFVKKHTATEISVAHYTGRIIYDTRAF 829
            |.|:..|:||      |.....||.::.. |:. ..|..|...:..  ..:.||.|::.||...|
Zfish   456 PPGIMSILDDVCATMHAKGEGADQTMLQKLRMQINNHEHFNSWNQG--FIIHHYAGKVSYDAEGF 518

  Fly   830 TDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGC 894
            .:.|||.:..::||..:||....|..:|...|                 .:|:|... .|..:..
Zfish   519 CERNRDVLFTDLIELMQSSEIAFIRALFPENL-----------------NAEKKGRP-TTAGSKI 565

  Fly   895 ISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVL 959
            ..|.|:|.:          ||:|...       |::|||:.:...||:.:....|:.|::.||:.
Zfish   566 KKQANDLVS----------TLMKCTP-------HYIRCIKPNETKKPKDWEESRVKHQVEYLGLK 613

  Fly   960 DTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEMTKDNC-------------RLLFLRLKMEG 1011
            :.:..|:.|::.|..|.:||.||..|          ||::.             .|..:.:..:.
Zfish   614 ENIRVRRAGYAYRRIFRKFLNRYAIL----------TKESWPTWRGDEKQGVLHLLRSVNMDQDQ 668

  Fly  1012 WALGKTKVFLRYYNDEFLARLYELQVKK----VIKVQSMMRALLARKRV----KGGKVFKLGKKG 1068
            :.||.||:|::.....||  |.|.:.:|    ...:|:..|...|||:.    :......|.||.
Zfish   669 YQLGHTKIFIKAPESLFL--LEETRERKFDGYARTIQTAWRKYCARKKYVQMREEASDLLLNKKE 731

  Fly  1069 PEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTADFIRPFAKKWREKSIFQVLLHYRAA 1133
            ...|.:..:.:.. :.|..||..|...|.::.   ..:.||.:..|.:::  |||          
Zfish   732 RRRHSLNRNFVGD-YLGMDDRPELRQFVGKRE---KIDFADKVNKFDRRF--KSI---------- 780

  Fly  1134 RFQDFVNLSQQVHIYNQRMV-AGLNK-CTRAVPFERINMREVNSSQLGPLPVPIKKMPFRLDQIP 1196
             .:|.:...:.|::..:..| .|..| ..:.|...:|::.::.:..|..|               
Zfish   781 -KRDLILTPKSVYLIGREKVKQGPEKGLVKEVLKRKIDVEKILAVSLSTL--------------- 829

  Fly  1197 FYDTQYMV---DPANSISRQAFPNQ---LLTQHMEDDEPWDSPLQRNPSMTSCALTYNAYKKEQA 1255
              ...:|:   |..:|:....|..:   ||.:..|:......||:.:.:|..      ..|||: 
Zfish   830 --QDDFMILHEDEYDSLLECVFKTEFISLLARRYEERTQRKLPLKYSNTMEM------KLKKEK- 885

  Fly  1256 CQTNWDRMGESDNIYNQGYFRDPQQLR--RNQMQMNMNAYNNAYNSYNSNYNNQNWGVHRSGSRR 1318
             ...|:..|.....:.||. .|...||  ...:|:::..      ....|......|:.:|...|
Zfish   886 -WGPWNAGGSRQVQFMQGQ-GDVAVLRPSNKMLQVSIGP------GLPKNSRPTKKGITQSQPNR 942

  Fly  1319 NSLKGY----AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEGDNSED 1379
            :....:    |||.||...........|:.|.|..|.|:.:|          :|.||        
Zfish   943 SRTHHHTPTRAAPGPPVAHQNGGLKNANHRNSQHHNNQRPTS----------ENTAR-------- 989

  Fly  1380 PPFNFKAMLRKTNYPRGSETNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDEGYNSSSGNYG 1444
             ||              ..||......|     |.:|..|.|.|.......|...|.|....:.|
Zfish   990 -PF--------------LPTNVSQLKER-----GSRHAPQQPNLDFLRVPDQGAAGRNRQPTDNG 1034

  Fly  1445 VSRKFGQQQRAPTLRQSPASVGR 1467
                 |...|..|.|.:|.. ||
Zfish  1035 -----GMAHRQSTNRPAPGG-GR 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 188/713 (26%)
myo1eaXP_005168983.2 None
Blue background indicates that the domain is not in the aligned region.

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