DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and myo10

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_001362203.1 Gene:myo10 / 548806 XenbaseID:XB-GENE-1018818 Length:2086 Species:Xenopus tropicalis


Alignment Length:1253 Identity:317/1253 - (25%)
Similarity:525/1253 - (41%) Gaps:238/1253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 EKPEKMYP------EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLN----------SN 375
            :|...::|      ||:|||.:..:.:|:.:|..|....:.|::||.||.|:|          .|
 Frog    52 QKVTSIHPTSADGVEDMAALSDLHEGSIMYNLFQRYQQNKIYTYIGSILASVNPYKMIAGLYDCN 116

  Fly   376 EIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIK 440
            .:      |.::::..   .|..||||:||...|:.:....:.|.:::||||.:||:.:.:|::|
 Frog   117 AV------ELYSRHHM---GEIPPHIFAVASECYRCLWKRHDNQCVLISGESGAGKTESTKLILK 172

  Fly   441 HLCYLGD-----GNRGATGRVESSIKAILMLV----NAGTPVNNDSTRCVLQYCLTFGK------ 490
            .|..:..     .::..|..||.:|.....::    ||.|..||:|:|        |||      
 Frog   173 FLSAMSQHSLEISSKEKTASVEQAILESSPIMEAFGNAKTVYNNNSSR--------FGKFIQLNI 229

  Fly   491 --TGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPP 553
              .|.:.|.....|:|||.||...:..:.|:||||...:...::.:...|.|:|:: |.||....
 Frog   230 CQKGHIQGGRIVDYLLEKNRVVRQNPEERNYHIFYALLEGAGKEERDAFYLLQAEK-YHYLNQSG 293

  Fly   554 EVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQNGKYAEV 618
            .:        .|:...:.|.::|.:..:..:.|:.:::..:.::||.||::||:.|...|. |::
 Frog   294 CI--------LDETISDHETFQEVKAAMEVMKFSREEVREIFRLLAGILHLGNMEFITAGG-AQI 349

  Fly   619 ENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFII 683
            .:...:.|.:|||.:|.::...:||...|:..|.......:.|:|.|:||:||..|||:...::|
 Frog   350 SSKTALGRASELLGLDSEQMAEALTQRSMILRGEEISTPLSVEQAVDSRDSVAMALYSQCFAWVI 414

  Fly   684 NRINMNMSFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEME 748
            .:||..:...    .|..:|.|.|:||||.|..|..||..||..||::|.::|:.||..|.||..
 Frog   415 MKINSRIKGK----DDFKSIGILDIFGFENFEVNRFEQFNINYANEKLQEYFNKHIFSLEQLEYS 475

  Fly   749 AEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQD-LIMDRVSEKHSQ---FVKKHT 809
            .|.:....:::.||...|| |:.|..||..:|::.|...|..| .:::::.::|:.   :||...
 Frog   476 REGLAWNAIDWIDNGECLD-LIEKKLGLLALINEESYFPQATDNTLLEKLHKQHANNHFYVKPRV 539

  Fly   810 AT-EISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFR-SSLDESIMLMFTNQLTKAGNLTMPFE 872
            |. ...|.||.|.::||.|...:.|||....:::...| ||||      |...|         ||
 Frog   540 AVHNFGVKHYAGEVLYDVRGTLEKNRDTFRDDLLNLLRESSLD------FIYDL---------FE 589

  Fly   873 AVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADL 937
            .|..::..|       ||.:|   ..:...|::..|:.:..:|:..||.:   ...|||||:.::
 Frog   590 HVSSRNNQE-------TLKSG---NKHKKPTVSLQFKDSLHSLMAKLSTS---NPFFVRCIKPNI 641

  Fly   938 EYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEMTKDNCR- 1001
            ...|..|...||..|::..|:|:||..|:.||..|..|::|..||:.|..:...|.:| |..|. 
 Frog   642 HKMPDQFDDTVVLNQLRYSGMLETVRIRKAGFPVRRLFNDFCFRYKVLMKNLSLPEDM-KGKCEV 705

  Fly  1002 LLFLRLKME-GWALGKTKVFLRYYNDEFLARLYELQV-KKVIKVQSMMRALLARKRVKGGKVFKL 1064
            ||.|....: .|.:||||||||...:..|.:..:::| |..:.:|:.:...:|||:.|  ||.  
 Frog   706 LLHLHDNTDTEWQIGKTKVFLRESLEHKLEKQRDIEVFKAALIIQAHIMGFVARKQYK--KVL-- 766

  Fly  1065 GKKGPEHHDVAASKIQKAFRGF---RDRVRLPPLVNEKSGQLNENTADFIRPFAKKWREKSIFQV 1126
                     .....|||.:|.|   |..:||.........||....|   |...|:.||:.  |.
 Frog   767 ---------YCVVVIQKNYRAFLWRRKFLRLKKAAVTFQRQLRGQIA---RRIYKQLREQK--QR 817

  Fly  1127 LLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFERINMREVNSSQLGPLPVPIKKMPFR 1191
            ....|..:.::.....::.....:.....|.|.......| |..||.:..:...|....::...:
 Frog   818 EEEERRRKEEEERKKKEEEERRRREEEERLRKEEERKKKE-IEERERHRQEEETLAKQAEEARKQ 881

  Fly  1192 LDQIPFYDTQYMVDPANSISRQAFPNQ---LLTQHMEDDEPWDSPLQRNPSMTSCALTY------ 1247
            .:.....:.|    ..|.|.:|....|   :|....|.|:     |||.......:||.      
 Frog   882 QELAAMLEAQ----NHNEIDKQKENKQVEEILRLEKEIDD-----LQRQKEKQELSLTEASLQRL 937

  Fly  1248 -----NAYKK--EQACQT--------NWDRMGE-----------SD------NI----------- 1269
                 |..|:  |:||:.        |:|.:.|           ||      ||           
 Frog   938 QELRDNELKRLEEEACRAAQEFLESLNFDEIDECVKNIEMSLSVSDVFPELSNIPGVSSTKPSFN 1002

  Fly  1270 YNQGYFRDPQQLRRNQMQMNMNAYNNAYNSYNSNYNNQNW-GVHRS--GSRRNSLKGYAAPPPPP 1331
            ::|.|   |::......:.:..|:.::.|.....:::|.. |:..|  .|..:....|..  ..|
 Frog  1003 FSQPY---PEEEVDEGFEADDEAFKDSPNPSEHGHSDQRTSGIRTSDDSSEEDPYMNYTV--GGP 1062

  Fly  1332 PPMPSSNYY----RNNPNQQQRNYQQRSSYPPSDPVRELQN---MARNEGDNSEDPPFNFKAMLR 1389
            |...:||..    .|..|.::....:.:...|.:...|.||   :...:||...|          
 Frog  1063 PQAATSNKLLSLDENKANVKKLTSGESTYCVPENAPCEPQNPGSIIIPDGDYDYD---------- 1117

  Fly  1390 KTNYPRGSETNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDEGYNSSSGNYGVSRKFGQQQR 1454
            ..:|..|:.|            ||...||.    .|...::..|  ||.|.|.|..|..:     
 Frog  1118 HDDYEDGAIT------------SGSSVTFS----NSVSSQWSPD--YNFSLGTYNGSSAY----- 1159

  Fly  1455 APTLRQSPASVGRSFEDS 1472
                |.|......|||||
 Frog  1160 ----RFSSEGAQSSFEDS 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 204/710 (29%)
myo10NP_001362203.1 SH3_19 7..58 CDD:465815 1/5 (20%)
MYSc_Myo10 77..727 CDD:276840 204/710 (29%)
IQ 744..763 CDD:459869 5/18 (28%)
SMC_N 871..>976 CDD:481474 22/113 (19%)
MYO10_CC 901..951 CDD:465249 11/54 (20%)
PH-like <1210..>1237 CDD:473070
PH2_MyoX 1240..1341 CDD:270108
PH3_MyoX-like 1406..1531 CDD:270109
MyTH4 1574..1720 CDD:214535
FERM_F1_Myosin-X 1722..1817 CDD:340726
B41 1729..1983 CDD:214604
FERM_C_MyoX 1979..2067 CDD:270023
Blue background indicates that the domain is not in the aligned region.

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