DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYO1D

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_056009.1 Gene:MYO1D / 4642 HGNCID:7598 Length:1006 Species:Homo sapiens


Alignment Length:843 Identity:215/843 - (25%)
Similarity:389/843 - (46%) Gaps:118/843 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 DLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPH 400
            |...::.......:.:||.|...|..|:|||::::|:|..::...:.::...:|:.:...|..||
Human    13 DFVLMDTVSMPEFMANLRLRFEKGRIYTFIGEVVVSVNPYKLLNIYGRDTIEQYKGRELYERPPH 77

  Fly   401 IFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYL-GDGNRGATGRVESS-IKAI 463
            :|::||.||:.|....:...||:||||.:||:..::.:::::..: ....|....||::. :|:.
Human    78 LFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVERVKNMLLKSN 142

  Fly   464 LMLV---NAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYF 525
            .:|.   ||.|..|::|:|......:.|...|...|...|.|:|||.||......:.:||.||..
Human   143 CVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQL 207

  Fly   526 YDFINQQNQLKEYNL-KADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHK 589
            ....::| .|:..:| |:..:|.|:.|     .::||...:|    ...:|...:.::.|.|..:
Human   208 LQGGSEQ-MLRSLHLQKSLSSYNYIHV-----GAQLKSSIND----AAEFRVVADAMKVIGFKPE 262

  Fly   590 QLETVRKVLAAILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAE 654
            :::||.|:|||||::||::|..:|....:||..:||.|||||.........:|....:..|....
Human   263 EIQTVYKILAAILHLGNLKFVVDGDTPLIENGKVVSIIAELLSTKTDMVEKALLYRTVATGRDII 327

  Fly   655 RRQYTTEEARDARDAVASTLYSRLVDFIINRINMNM---SFPRAVFGDTNAIIIHDMFGFECFNR 716
            .:|:|.:||...|||.|..:|.||..:|:.|||..:   ::...:.|....|.:.|::|||.|:.
Human   328 DKQHTEQEASYGRDAFAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKNTVIGVLDIYGFEIFDN 392

  Fly   717 NGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIID 781
            |..||..||..||::|..:.|.:...|..|.:.|.|...::::::|:..:|.:..:..|:..|:|
Human   393 NSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILD 457

  Fly   782 DASRSCQDQDLIMDRV--------SEKHSQFVKKHTAT---------EISVAHYTGRIIYDTRAF 829
            ||   |.:...:.|.:        ..||:.|..:....         :..:.||.|.::|....|
Human   458 DA---CMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCASDKILEFDRDFRIRHYAGDVVYSVIGF 519

  Fly   830 TDINRDFVPPEMIETFRSSLDESIMLMFTNQLTK----AGNLTMPFEAVQHKDESERKSYALNTL 890
            .|.|:|    .:.:.|:     .:|...:|.:.|    .|.|::       .:.::|...|....
Human   520 IDKNKD----TLFQDFK-----RLMYNSSNPVLKNMWPEGKLSI-------TEVTKRPLTAATLF 568

  Fly   891 SAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHSDVVQQQMKA 955
            ....|:.|:||                     |:...::||||:.:.:..|:.|..:..:.|::.
Human   569 KNSMIALVDNL---------------------ASKEPYYVRCIKPNDKKSPQIFDDERCRHQVEY 612

  Fly   956 LGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEP---VEMTKDNCRLLFLRLK-MEGWALGK 1016
            ||:|:.|..|:.||:.|..:::||.||:.:: :|..|   :...|:..:.|..|.. .:..|.||
Human   613 LGLLENVRVRRAGFAFRQTYEKFLHRYKMIS-EFTWPNHDLPSDKEAVKKLIERCGFQDDVAYGK 676

  Fly  1017 TKVFLRYYNDEFLARLYELQVKKVIKV----QSMMRALLARKRVKGGKV-------FKLGKKGPE 1070
            ||:|:|  ....|..|.||:.:.:|::    |.:.|..|||.|.|..|.       ::..|....
Human   677 TKIFIR--TPRTLFTLEELRAQMLIRIVLFLQKVWRGTLARMRYKRTKAALTIIRYYRRYKVKSY 739

  Fly  1071 HHDVAASKIQKAFRG---FRD-----RVRLPPLVNEKSGQLNENTADFIRPFAKKWREKSIFQ 1125
            .|:||     :.|.|   .||     :...||.|..:       ..:.::....:||...:.:
Human   740 IHEVA-----RRFHGVKTMRDYGKHVKWPSPPKVLRR-------FEEALQTIFNRWRASQLIK 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 187/709 (26%)
MYO1DNP_056009.1 MYSc_Myo1 24..682 CDD:276829 187/708 (26%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 572..594 9/42 (21%)
Myosin_TH1 803..996 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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