DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYH3

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_002461.2 Gene:MYH3 / 4621 HGNCID:7573 Length:1940 Species:Homo sapiens


Alignment Length:1162 Identity:260/1162 - (22%)
Similarity:484/1162 - (41%) Gaps:244/1162 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 LEKNAENRPMMVEMVEHPFLTE----LIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVK 323
            |.|:.:.|   :|....||..:    ::::::|....   .::.|:|.|...:..:   :|..| 
Human    17 LRKSEKER---IEAQNQPFDAKTYCFVVDSKEEYAKG---KIKSSQDGKVTVETED---NRTLV- 71

  Fly   324 RFDEKPEKMYP---------EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQ 379
               .|||.:|.         ||:|.|.:..:..::.:|:.|......|::.|...:::|..:...
Human    72 ---VKPEDVYAMNPPKFDRIEDMAMLTHLNEPAVLYNLKDRYTSWMIYTYSGLFCVTVNPYKWLP 133

  Fly   380 EFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCY 444
            .:..|....||.|.|.|..|||||::|.|||.||..:|.|.|:::|||.:||:.|.:.:|::...
Human   134 VYNPEVVEGYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFAT 198

  Fly   445 LGDGNRGATG----RVESSIKAIL------------MLVNAGTPVNNDSTRCVLQYCLTFGKTGK 493
            :     .|||    :.:|.:|..|            ...||.|..|::|:|......:.||.|||
Human   199 I-----AATGDLAKKKDSKMKGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGK 258

  Fly   494 MSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPS 558
            ::.|....|:|||.||......:.::||||....  |::.:|.|..|.....|.|    |.:...
Human   259 LASADIETYLLEKSRVTFQLKAERSYHIFYQILS--NKKPELIELLLITTNPYDY----PFISQG 317

  Fly   559 KLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQNGK--YAEVENT 621
            ::.....|   :.|.....::.:..:.|..::...:.|:..|:::.||::|:|..:  .||.:.|
Human   318 EILVASID---DAEELLATDSAIDILGFTPEEKSGLYKLTGAVMHYGNMKFKQKQREEQAEPDGT 379

  Fly   622 DIVSRIAELLRVDEKKFMWSLTNFIMVKGGIAERRQY-----TTEEARDARDAVASTLYSRLVDF 681
            ::..:.|.|:.::....:.:|. |..||.|    .:|     |.::...|.:|::.::|.:|..:
Human   380 EVADKTAYLMGLNSSDLLKALC-FPRVKVG----NEYVTKGQTVDQVHHAVNALSKSVYEKLFLW 439

  Fly   682 IINRIN--MNMSFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEM 744
            ::.|||  ::...||..|     |.:.|:.|||.|..|.||||.||..||::|..:|..:|:.|.
Human   440 MVTRINQQLDTKLPRQHF-----IGVLDIAGFEIFEYNSLEQLCINFTNEKLQQFFNHHMFVLEQ 499

  Fly   745 LEMEAEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDD-----ASRSCQDQDLIMDRVSEKHSQF 804
            .|.:.|.|:...::|..:..|...|:.||.|:|.|:::     .:.....::.:.|:...|.:.|
Human   500 EEYKKEGIEWTFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNF 564

  Fly   805 -----VKKHTATEISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLT-- 862
                 ||.......|:.||.|.:.|....:.:.|:|.:...::..::.|.:..:..::....|  
Human   565 QKPKVVKGRAEAHFSLIHYAGTVDYSVSGWLEKNKDPLNETVVGLYQKSSNRLLAHLYATFATAD 629

  Fly   863 -KAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLG 926
             .:|.          |..:::|..:..|:||   ....||..|.:|.|.|              .
Human   630 ADSGK----------KKVAKKKGSSFQTVSA---LFRENLNKLMSNLRTT--------------H 667

  Fly   927 VHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFL---AFD 988
            .||||||..:....|.:....:|..|::..|||:.:...:|||.:|:.:.:|.:||:.|   |..
Human   668 PHFVRCIIPNETKTPGAMEHSLVLHQLRCNGVLEGIRICRKGFPNRILYGDFKQRYRVLNASAIP 732

  Fly   989 FDEPVEMTKDNCRLLFLRLKME--GWALGKTKVF--------LRYYNDEFLAR------------ 1031
            ..:.:: :|..|..|...:.::  .:..|.||||        |....|:.||:            
Human   733 EGQFID-SKKACEKLLASIDIDHTQYKFGHTKVFFKAGLLGTLEEMRDDRLAKLITRTQAVCRGF 796

  Fly  1032 LYELQVKKVIK-------VQSMMRALLARKRVKGGKVF----KLGKKGPEHHDVAASKIQKAFRG 1085
            |..::.:|:::       :|..:|:.:..|.....|:|    .|.|......::|..|  :.|:.
Human   797 LMRVEFQKMVQRRESIFCIQYNIRSFMNVKHWPWMKLFFKIKPLLKSAETEKEMATMK--EEFQK 859

  Fly  1086 FRDRV------------RLPPLVNEKSG-QL-----NENTADF-----------------IRPFA 1115
            .:|.:            :|..||.||:. ||     :||..|.                 |:...
Human   860 TKDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVT 924

  Fly  1116 KKWREKSIFQVLLHYRAARFQD---------------FVNLSQQVHIYNQRM------VAGLNKC 1159
            ::..::......|..:..:.:|               ...:.::.|....::      ::||::.
Human   925 ERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEELSGLDET 989

  Fly  1160 TRAVPFERINMREVNSSQLGPLPVPIKKMPFRLDQIPFYDTQYMVDPANSISRQAFPNQLLTQHM 1224
            ...:..|:..::|.:...|.                   |.|...|..||:::   ....|.|.:
Human   990 IAKLTREKKALQEAHQQALD-------------------DLQAEEDKVNSLNK---TKSKLEQQV 1032

  Fly  1225 EDDEPWDSPLQRNPSMTSCALTYNAYKKEQACQTNWDRMGESDNIYNQGYFRDPQQL 1281
            ||.|   |.|::...: ...|..|..|.|...:...:.:.:.:|        |.|||
Human  1033 EDLE---SSLEQEKKL-RVDLERNKRKLEGDLKLAQESILDLEN--------DKQQL 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 5/18 (28%)
MYSc_Myo21 346..1022 CDD:276848 183/726 (25%)
MYH3NP_002461.2 Myosin_N 33..77 CDD:460670 9/53 (17%)
MYSc_Myh3 100..767 CDD:276878 183/718 (25%)
Actin-binding 656..678 11/35 (31%)
Actin-binding 758..772 5/13 (38%)
Myosin_tail_1 847..1924 CDD:460256 44/267 (16%)

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