DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYO1F

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_001427538.1 Gene:MYO1F / 4542 HGNCID:7600 Length:1119 Species:Homo sapiens


Alignment Length:1192 Identity:284/1192 - (23%)
Similarity:474/1192 - (39%) Gaps:260/1192 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQP 399
            :|:..|....::.|..:||.|.:....:::||.:|:|:|..:....|.......|:..::.||.|
Human    20 DDMVLLPQITEDAIAANLRKRFMDDYIFTYIGSVLISVNPFKQMPYFTDREIDLYQGAAQYENPP 84

  Fly   400 HIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKAIL 464
            ||:::.|..|::||...|.|.:::||||.:||:..|:.::.::..:..|     |.....:|.|:
Human    85 HIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGG-----GEKVQHVKDII 144

  Fly   465 M--------LVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHI 521
            :        ..||.|..||:|:|....:.:.|.:.|:..|...:.::|||.||...:..:.||||
Human   145 LQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHI 209

  Fly   522 FYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDF 586
            :|...:..:|: |.:...|.....|.||.       ....|:.|..:...: :.|..:.::.|..
Human   210 YYQLLEGASQE-QRQNLGLMTPDYYYYLN-------QSDTYQVDGTDDRSD-FGETLSAMQVIGI 265

  Fly   587 NHKQLETVRKVLAAILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMVK-- 649
            .....:.|.:::|.||::|||.|.::|.||.||:.|:::..|.||.:|..:....||:..|..  
Human   266 PPSIQQLVLQLVAGILHLGNISFCEDGNYARVESVDLLAFPAYLLGIDSGRLQEKLTSRKMDSRW 330

  Fly   650 GGIAERRQYT--TEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIHDMFGFE 712
            ||.:|....|  .|:|...|||:|..||:||.||::..||..|..|:..:    :|.:.|::|||
Human   331 GGRSESINVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAMQKPQEEY----SIGVLDIYGFE 391

  Fly   713 CFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAED-----IDTINLNFYDNKTALDNLLTK 772
            .|.:||.||..||.:||::     |:|||...|:.|.|:     |....:.:::||...|.:..|
Human   392 IFQKNGFEQFCINFVNEKL-----QQIFIELTLKAEQEEYVQEGIRWTPIQYFNNKVVCDLIENK 451

  Fly   773 --PDGLFYIIDD------ASRSCQDQDLI--MDRVSEKHSQFVKKHTATEISVAHYTGRIIYDTR 827
              |.|:..::||      |:....||.|:  :......|..|  ...:....:.||.|::.||..
Human   452 LSPPGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHF--NSWSAGFVIHHYAGKVSYDVS 514

  Fly   828 AFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSA 892
            .|.:.|||.:..::||..::|....:.::|..:|              ..|:..|.|.|.:.:. 
Human   515 GFCERNRDVLFSDLIELMQTSEQAFLRMLFPEKL--------------DGDKKGRPSTAGSKIK- 564

  Fly   893 GCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFH------------ 945
               .|.|:|  :|...|.|               .|::|||:.:...:||.:.            
Human   565 ---KQANDL--VATLMRCT---------------PHYIRCIKPNETKRPRDWEENRTGDSPPRGD 609

  Fly   946 SDVVQQQMKALGVLDTVIARQKGFSSRL---------PFDEFLRRYQFLA------FDFDEPVEM 995
            |.....|.:|.|.:.......:|..|||         |.:....||..|.      :..||    
Human   610 SAYPPHQSQAPGGIPGPEGEHQGAQSRLRLPPPVRQIPAEPSALRYAILTPETWPRWRGDE---- 670

  Fly   996 TKDNCRLLFLRLKME--GWALGKTKVFLRYYNDEFLARLYELQVKKVIKVQSMMRALLARKRVKG 1058
             :...:.|...:.||  .:.:|.||||::  |.|.|..|.|::.:|                   
Human   671 -RQGVQHLLRAVNMEPDQYQMGSTKVFVK--NPESLFLLEEVRERK------------------- 713

  Fly  1059 GKVFKLGKKGPEHHDVAASKIQKAFR---------GFRDRVRLPPLVNEKSGQLNENTADFI--- 1111
                         .|..|..||||:|         ..|:... ..|:|:|..:.|....:|:   
Human   714 -------------FDGFARTIQKAWRRHVAVRKYEEMREEAS-NILLNKKERRRNSINRNFVGDY 764

  Fly  1112 -----RPFAKKWREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRM------VAGLNKCTRAVPF 1165
                 ||..:::..|              ::.|:.:..|..|::|.      :....||...:..
Human   765 LGLEERPELRQFLGK--------------RERVDFADSVTKYDRRFKPIKRDLILTPKCVYVIGR 815

  Fly  1166 ERINMREVNSSQLGPLPVPIKKMPFRLD------------QIPFYDTQYMVDPANSISRQAFPNQ 1218
            |::.    ...:.|.:...:||   ::|            |..|:..|  .|.|:|.....|..:
Human   816 EKVK----KGPEKGQVCEVLKK---KVDIQALRGVSLSTRQDDFFILQ--EDAADSFLESVFKTE 871

  Fly  1219 ---LLTQHMEDDEPWDSPLQRNPSMTSCALTYNAYKKEQACQTNWDRMGESDNIYNQGYFRDPQQ 1280
               ||.:..|  |....||   |...|..|.:.. |||     .|...|.....:::| |.|...
Human   872 FVSLLCKRFE--EATRRPL---PLTFSDTLQFRV-KKE-----GWGGGGTRSVTFSRG-FGDLAV 924

  Fly  1281 LRRNQMQMNMNAYNNAYNSYNSNYNNQNWGVHRSGSRRNSLKGYAAPPPPPPPMPSSNYYRNNPN 1345
            |:.....:.::..:....|......    |:.:...||:|.....|.|.||..|           
Human   925 LKVGGRTLTVSVGDGLPKSSKPTRK----GMAKGKPRRSSQAPTRAAPAPPRGM----------- 974

  Fly  1346 QQQRNYQQRSSYPPSDPVRELQNMARNEGDNSEDPPFNFKAMLRKTNYPRG---SETNTYDFNNR 1407
                   .|:..|||.....|.....:.|.....|.......|..:..||.   ||.|| :|.| 
Human   975 -------DRNGVPPSARGGPLPLEIMSGGGTHRPPRGPPSTSLGASRRPRARPPSEHNT-EFLN- 1030

  Fly  1408 RGSDSGDQHTFQPPKLRSTGRR 1429
                ..||......:.||.|:|
Human  1031 ----VPDQGMAGMQRKRSVGQR 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 192/731 (26%)
MYO1FNP_001427538.1 None
Blue background indicates that the domain is not in the aligned region.

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