DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYO1B

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_047300366.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1156 Species:Homo sapiens


Alignment Length:868 Identity:209/868 - (24%)
Similarity:384/868 - (44%) Gaps:175/868 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 DLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQPH 400
            |:..||...:|..|.:|:.|....|.|::||.:::|:|.......:..|...:||.::..|..||
Human    39 DMVLLEPLNEETFINNLKKRFDHSEIYTYIGSVVISVNPYRSLPIYSPEKVEEYRNRNFYELSPH 103

  Fly   401 IFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKH---LCYLGDGNRGATGRVESSIKA 462
            ||:::|.||:.:....:.|.|:::|||.:||:..::|::.:   :|..|........::..|...
Human   104 IFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPV 168

  Fly   463 ILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYD 527
            :....||.|..|::|:|......:.|...|...|.|.:.|:|||.||......:.|||:||....
Human   169 LEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLS 233

  Fly   528 FINQQ--NQLKEYNLKAD-RNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHK 589
            ..:::  |:||   |:.| ..|.||.:      ...|....|...|   :|...|.::.:.|...
Human   234 GASEELLNKLK---LERDFSRYNYLSL------DSAKVNGVDDAAN---FRTVRNAMQIVGFMDH 286

  Fly   590 QLETVRKVLAAILNIGNIRF----RQNG-KYAEVENTDIVSRIAELLRVD----EKKFMWSLTNF 645
            :.|:|..|:||:|.:|||.|    |.|| ..:::::.:.:..|.||..:|    |:.|     :|
Human   287 EAESVLAVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTGIDQSVLERAF-----SF 346

  Fly   646 IMVKGGIAERRQYTT----EEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIH 706
            ..|:   |::.:.:|    .:|..||||:|..|||||..:::||||.::.....|......::  
Human   347 RTVE---AKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVL-- 406

  Fly   707 DMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLT 771
            |::|||.|..|..||.:||..||::|..:.:.....|..|...|||:..::::::|....|.:..
Human   407 DIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIEN 471

  Fly   772 KPDGLFYIIDDASRSCQDQDLIMDRV-SEKHSQFVKKHTATE-------------------ISVA 816
            ..:|:..::|:   .|.....:.|.. .||.:|....|...|                   ..:.
Human   472 NTNGILAMLDE---ECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTSLPHSCFRIQ 533

  Fly   817 HYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESE 881
            ||.|:::|....|.|.|.|.:                                      ::|.|:
Human   534 HYAGKVLYQVEGFVDKNNDLL--------------------------------------YRDLSQ 560

  Fly   882 ---RKSYAL--NTLSAGCISQVNNLR--TLAANFRFTCLTLLKML-SQNANLGVHFVRCIRADLE 938
               :.|:||  :....|..:::|..|  |..:.|:.:..||:|.| ::|.|    ::|||:.:.:
Human   561 AMWKASHALIKSLFPEGNPAKINLKRPPTAGSQFKASVATLMKNLQTKNPN----YIRCIKPNDK 621

  Fly   939 YKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFD----FDEPVEMTKDN 999
            .....|:..:|..|::.||:|:.|..|:.|::.|..::..|.||:.|...    :..|   .:..
Human   622 KAAHIFNEALVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGP---ARSG 683

  Fly  1000 CRLLF--LRLKMEGWALGKTKVFLRYYNDEFLARLYELQVKKVIKVQSMMRALLARKRVKGGKVF 1062
            ..:||  |.:.:|.::.|::|:|:|  |...|.:|.:|:.:::                      
Human   684 VEVLFNELEIPVEEYSFGRSKIFIR--NPRTLFKLEDLRKQRL---------------------- 724

  Fly  1063 KLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSG----------------QLNENTADFI 1111
                      :..|:.|||.:||::.|...  |:.:||.                |..:::|..|
Human   725 ----------EDLATLIQKIYRGWKCRTHF--LLMKKSQIVIAAWYRRYAQQKRYQQTKSSALVI 777

  Fly  1112 RPFAKKWREKSIFQVLLHYRAAR 1134
            :.:.:.|:.:.|.:.|.|.:..:
Human   778 QSYIRGWKARKILRELKHQKRCK 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 184/728 (25%)
MYO1BXP_047300366.1 MYSc_Myo1 49..708 CDD:276829 184/728 (25%)
IQ 769..791 CDD:197470 4/21 (19%)
Myosin_TH1 961..1138 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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