DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Myo61F

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster


Alignment Length:854 Identity:212/854 - (24%)
Similarity:369/854 - (43%) Gaps:158/854 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 EDLAALEN-PVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSENQ 398
            :|...||| ..:|..|.:|:.|......|::||.:|:|:|..:....:..:....||.|...|..
  Fly    40 QDFVLLENYQSEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQLPIYTDDHVKAYRNKHFYEMP 104

  Fly   399 PHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHL--CYLGDGNR----GATGRVE 457
            ||||:|.|.|::.::.....|.:::||||.|||:..::.:::.:  |   .||:    |...::.
  Fly   105 PHIFAVTDNAFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAAC---SGNQTTVEGVKDKLL 166

  Fly   458 SSIKAILMLVNAGTPVNNDSTRCVLQYCLTFG---------KTGKMSGAVFNMYMLEKLRVATTD 513
            .|...:....||.|..|::|:|        ||         |...:.|.:.| |:|||.||....
  Fly   167 KSNPVLEAFGNAKTNRNDNSSR--------FGKYMDIQFDFKGAPIGGNILN-YLLEKSRVVAQM 222

  Fly   514 GTQHNFHIFYYFYDFINQQNQLKEYNL-KADRNYRYLRVPPEVPPSKLKYRRDDPEGNVER---- 573
            |.:.||||||......::. .|:|..| :|...|.||              .|...|.|.|    
  Fly   223 GGERNFHIFYQLLAGADEA-LLQELRLERALDTYSYL--------------TDGLNGTVTRINDA 272

  Fly   574 --YREFENILRDIDFNHKQLETVRKVLAAILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEK 636
              :::.:..|..|||..::...:..::|:||::||:.|.:....|:|.:.|:|...|.||.|:..
  Fly   273 DSFKQVQQALTVIDFTKEEQREIFGIVASILHLGNVGFTEVEGNAKVNSRDLVVTAARLLGVNAS 337

  Fly   637 KFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTN 701
            :...:||:..:...|.........|.|..||||:|..:|.||..:::.|:|:::..........|
  Fly   338 ELEAALTHRTIDARGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRNN 402

  Fly   702 AIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTAL 766
            .:.|.|::|||.|.:|..||..||..||::|..:.:....||..|...|.|:.|.:.::|||...
  Fly   403 VMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVIC 467

  Fly   767 DNLLTKPDGLFYIID-DASRSCQDQD-LIMDRVSEK---HSQFVKKHTA----------TEISVA 816
            :.:..|..|:..|:| :..|..:..| ..::::::|   |..:|....|          .|..:.
  Fly   468 NLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVCHEKAPAHIKKIMLRDEFRLV 532

  Fly   817 HYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESE 881
            ||.|.:.|....|.|.|.|.:..::.||                |:||||               
  Fly   533 HYAGEVTYSVNGFLDKNNDLLFRDLKET----------------LSKAGN--------------- 566

  Fly   882 RKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQNANLGVHFVRCIRADLEYKPRSFHS 946
              ....|......:..:....|....||.:...|:.:|....   ..::|||:.:.......|:.
  Fly   567 --GIVRNCFPEKELRSLKRPETAITQFRASLNNLMDILMCKE---PSYIRCIKPNDLQTANVFND 626

  Fly   947 DVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAF----DFDEP-------VEMTKDNC 1000
            ::|..|:|.||:::.:..|:.||:.|..::.||.||:.|:.    ::..|       .::.||  
  Fly   627 ELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYKGPGGPKAGVQQLVKD-- 689

  Fly  1001 RLLFLRLKMEGWALGKTKVFLRY------YNDEFLARLYE------------LQVKKVIKVQS-- 1045
                |....|.:.:|:||:|:|:      ..|.:..:.:|            :|.:|.:|:::  
  Fly   690 ----LGWDEEKYRVGETKLFIRWPRTLFDTEDAYQEKKHEIAAIIQAHWKGLMQRRKYLKLRAQV 750

  Fly  1046 -MMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTAD 1109
             :|::...|         ||.::..:....||.||:...:||..|       |:.....||   :
  Fly   751 IIMQSYCRR---------KLAQQAAKKRREAADKIRAFIKGFITR-------NDAPNGFNE---E 796

  Fly  1110 FIRPFAKKW 1118
            ||....:.|
  Fly   797 FIANAKRMW 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 185/723 (26%)
Myo61FNP_476934.2 MYSc_Myo1 52..707 CDD:276829 185/723 (26%)
Myosin_TH1 863..1049 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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