DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Myo3b

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_796350.2 Gene:Myo3b / 329421 MGIID:2448580 Length:1333 Species:Mus musculus


Alignment Length:1160 Identity:385/1160 - (33%)
Similarity:618/1160 - (53%) Gaps:106/1160 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MYLPYAQLPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALK----IQHYDEEHQVSIEEEYR 62
            |.|....||||.:.:||.|.|.:|...||::.....:..:.|:|    :...|||    ||.||.
Mouse    29 MMLGLESLPDPMETWEIIETIGKGTYGKVYKVANKRDGSLAAVKVLDPVSDMDEE----IEAEYN 89

  Fly    63 TLRDYCDHPNLPEFYGV-YKLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYII 126
            .|:....|||:.:|||: ||..:..| .::|.|:|.|.||:..::|..||:..:|:.|..|:||:
Mouse    90 ILQFLPSHPNVVKFYGMFYKADRCVG-GQLWLVLELCNGGSVTELVKGLLRCGKRLDEAVISYIL 153

  Fly   127 RETCRAAIELNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEV 191
            .........|:.:.::|||::|:|||||..|.|||.|||:|.|:.||..:|.|.:|:|.||||||
Mouse   154 YGALLGLQHLHCHRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEV 218

  Fly   192 VSAMESREPDITVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQIN 256
            ::..:..:.....|.|||:||||.|||.||.||..:|||.:.:|:|.|||||||:.|.:|.::.|
Mouse   219 IACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFEMHPVKMLFKIPRNPPPTLLHPDSWCEEFN 283

  Fly   257 DFISESLEKNAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGY 321
            .|||:.|.|:.|.||.:..:::|||:.........::..:|::|:..:....:.|.....:..|.
Mouse   284 HFISQCLIKDFEKRPSVTHLLDHPFIKGTQGKVLCLQKQLAKVLQDQKHRNPVAKTRHERMHTGR 348

  Fly   322 VKRFDEKPEKMYPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFH 386
            ..|.::..:....:||..||...::.||..|:.|......|:::||||::||..:....:..:|.
Mouse   349 PHRVEDAGKCCLEDDLVNLEVLDEDTIIYWLQKRYADALIYTYVGDILIALNPFQNLSIYSPQFS 413

  Fly   387 AKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGN-- 449
            ..|....||.|.||||:.||.|||.::...:.|.||:||||.|||:.:|.|:::||.:||..:  
Mouse   414 RLYHGVKRSSNPPHIFASADNAYQCLVTFSKDQCIVISGESGSGKTESAHLIVQHLTFLGKADNQ 478

  Fly   450 --RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATT 512
              |....:|.|.::|   ..||.|.:|::|:|......:.|..||.:.||..:.|:|||.||...
Mouse   479 TLRQKILQVNSLVEA---FGNARTAINDNSSRFGKYLEMMFTPTGAVMGARISEYLLEKSRVIQQ 540

  Fly   513 DGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYL-----RVPPEVPPSKLKYRRDDPEGNVE 572
            ...:.|||||||.|..:..|.:|.|:.|..::..||:     ||..:: .||..||        .
Mouse   541 AAGEKNFHIFYYIYAGLYHQKKLAEFRLPEEKPPRYIAGETERVMQDI-TSKESYR--------T 596

  Fly   573 RYREFENILRDIDFNHKQLETVRKVLAAILNIGNIRF------RQNGKYAEVENTDIVSRIAELL 631
            ::...::..:.|.|..|::.:|.::||.|||||:|.|      .|..| :||.|.:.:...|.:|
Mouse   597 QFEAIQHCFKIIGFADKEVHSVYRILAGILNIGSIEFAAISSQHQTDK-SEVPNPEALENAACVL 660

  Fly   632 RVDEKKFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAV 696
            .:..::...:||:..:|..|....|..|.:.|.|.|||::..||.||..:|:||||..:...:.:
Mouse   661 CISSEELQEALTSHCVVTRGETIVRANTVDRAEDVRDAMSKALYGRLFSWIVNRINTLLQPDKNI 725

  Fly   697 FG--DTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNF 759
            ..  |...:.|.|:||||.|.||..|||.||..|||:||::||.:|..|.:|.:.|.:|.:.:.:
Mouse   726 CSAEDRMNVGILDIFGFEDFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYKNEGVDAVLVQY 790

  Fly   760 YDNKTALDNLLTKPDGLFYIIDDASRSCQ--DQDLIMDRVSEKHSQFVKKHTATEI--SVAHYTG 820
            .||:..||..|.||.||..::|:.||..|  ||.|:.........:|..:....|:  .:.||.|
Mouse   791 EDNRPLLDMFLQKPLGLLALLDEESRFPQGTDQTLVDKFEDNLRCKFFWRPKGVELCFGIQHYAG 855

  Fly   821 RIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNL------------TMP--- 870
            .::||.....:.|||.:|.:::...|:|.::.:..:|:..|||.|||            ::|   
Mouse   856 PVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRAKITASSRSLPPHF 920

  Fly   871 ---------FEAVQHKDESERKSYALNTLSAGCISQVNNLR--TLAANFRFTCLTLL-KMLSQNA 923
                     .|.::|.:|:                  .|::  |:|:.||::.:.|| ||:....
Mouse   921 SAGRAKVDTLEVIRHPEET------------------TNMKRQTMASYFRYSLMDLLSKMVVGQP 967

  Fly   924 NLGVHFVRCIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFD 988
                ||:|||:.:.:.|...|..|.|..|:::.|:|:||..|::|:|.|:.|:||::||.:|||.
Mouse   968 ----HFIRCIKPNDDRKALQFSQDRVLAQLRSTGILETVSIRRQGYSHRIFFEEFVKRYYYLAFR 1028

  Fly   989 FDEPVEMTKDNCRLLFLRLKMEGWALGKTKVFLRYYNDEFLARLYELQVKKVIKVQSMMRALLAR 1053
            ..:.....|::|..:..:.:::.|.||||||||:||:.|.|..|....:.:|:.:|:..:..|..
Mouse  1029 AHQTPPANKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVMGRVVMLQAYTKGWLGA 1093

  Fly  1054 KRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTA 1108
            :|.|..|         |..:..|..||.|:||:..|.:|    .::|.:.:|:.|
Mouse  1094 RRYKRAK---------EKREKGAITIQSAWRGYDARRKL----KQRSRRRSESEA 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 115/277 (42%)
S_TKc 16..282 CDD:214567 111/270 (41%)
MYSc 327..1034 CDD:214580 244/754 (32%)
MYSc_Myo21 346..1022 CDD:276848 234/723 (32%)
Myo3bNP_796350.2 STKc_myosinIIIB_N 20..310 CDD:270808 118/285 (41%)
S_TKc 43..309 CDD:214567 111/270 (41%)
MYSc 362..1069 CDD:214580 242/741 (33%)
MYSc_Myo3 373..1062 CDD:276830 234/723 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0587
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 611 1.000 Inparanoid score I914
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52654
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003766
OrthoInspector 1 1.000 - - otm42503
orthoMCL 1 0.900 - - OOG6_104503
Panther 1 1.100 - - O PTHR46256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2623
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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