DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaC and tnika

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_005163444.1 Gene:tnika / 325042 ZFINID:ZDB-GENE-030131-3767 Length:1419 Species:Danio rerio


Alignment Length:678 Identity:160/678 - (23%)
Similarity:278/678 - (41%) Gaps:187/678 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVSIEEEYRTLRDYCDHPNL 73
            |.||...||:.|.:..|...:|::.:.:...::.|:|......|.:..|:.|...|:.|..|.|:
Zfish    18 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKCMDVTGEEEEEIKAEINMLKKYSHHRNI 82

  Fly    74 PEFYGVY-KLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIELN 137
            ..:||.: |.:.|...|::|.|||:|..|:..|::..  .....::|:..|||.||..|....|:
Zfish    83 ATYYGAFIKKNPPGVDDQLWLVMEFCGAGSVTDLIKN--TKGNSLKEDWTAYISREILRGLTHLH 145

  Fly   138 RNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREPDI 202
            ::.|:||||:|.|:|||:|..|||.|||:|.|:|.|:.:|.|.||:|.||||||::..|:.:...
Zfish   146 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVSRRNTFIGTPYWMAPEVIACDENPDATY 210

  Fly   203 TVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISESLEKNA 267
            ..::|:|:||||.:|:|:|.||..::||.||:|.|.||.||.| :...|:::.:.||...|.||.
Zfish   211 DYKSDLWSLGITALEMAEGAPPLCELHPMRALFLIPRNAPPRL-KSKKWTKRFHSFIESCLVKNH 274

  Fly   268 ENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPEKM 332
            ..||...::::|||:.:: .||..:|..:.:.::.:|                  |:..|:.|  
Zfish   275 NMRPGTDQLLKHPFIRDM-ANERTIRIQLKDHIDRTR------------------KKRGERDE-- 318

  Fly   333 YPEDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKSRSEN 397
                                                                  .:|.:....|.
Zfish   319 ------------------------------------------------------TEYEYSGSEEE 329

  Fly   398 QPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSIKA 462
            :           :.||...||..|:    :..|:||..|..::                      
Zfish   330 E-----------EAMLEIGEPSSII----NIPGESTLRRDFLR---------------------- 357

  Fly   463 ILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHIFYYFYD 527
             |.:.|   ...:|:.|                        .::|.....:|.:|..        
Zfish   358 -LQVAN---KERSDALR------------------------RQQLEQQQNEGHKHQL-------- 386

  Fly   528 FINQQNQL---KEYNLKADRNYRYLRVPPEVPPSKLKY---RRDDPEGNVERYREFENILRDIDF 586
            ...:|.::   ||...:.:...|..|...:....:.:|   ||::.....||.:|:  |.|.::.
Zfish   387 LAERQKRIEEQKEQRRRLEEQQRREREARKQQEQRHRYEELRREEERRQAEREQEY--IRRQLEE 449

  Fly   587 NHKQLETVRKVL----AAILNIGNIRFRQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFIM 647
            ..:|||.:::.|    |.:|..         |..:||......|:...|: .|:.::.||     
Zfish   450 EQRQLEILQQQLLQEQALLLEY---------KRKQVEEQRQADRLQRQLQ-QERAYLVSL----- 499

  Fly   648 VKGGIAERRQYTTEEARDARDAVASTLY 675
                    :|...::.:|:|......||
Zfish   500 --------QQQQQQQQQDSRPEEKKQLY 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 102/273 (37%)
S_TKc 16..282 CDD:214567 99/266 (37%)
MYSc 327..1034 CDD:214580 52/359 (14%)
MYSc_Myo21 346..1022 CDD:276848 50/340 (15%)
tnikaXP_005163444.1 PKc_like 18..313 CDD:304357 108/316 (34%)
S_TKc 25..289 CDD:214567 99/266 (37%)
CNH 1101..1399 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.