DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Myo10A

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster


Alignment Length:1446 Identity:339/1446 - (23%)
Similarity:570/1446 - (39%) Gaps:378/1446 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQ----EFHAKYRFKSRS 395
            ||:..|::..:.:::.:||.|...|..|:|.|.||:::|..::   ||.    |...:|..:...
  Fly   158 EDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKM---FPDAYGLEVAKQYAGRPLG 219

  Fly   396 ENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSI 460
            ...||:|::...|:..:   ..||.:|:||||.|||:.:.:|::::|..:..|...|:..:...|
  Fly   220 SLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281

  Fly   461 KAILMLV----NAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHI 521
            .....|:    ||.|..|::|:| ..:|...:.|:|.:.||....|:|||.|:.|....:.|:|:
  Fly   282 LEAAPLLEAFGNARTARNDNSSR-FGKYLEVYFKSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345

  Fly   522 FYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDF 586
            ||.....:::..:.|...|:||: |.||.          :...|...|.|: :...:..::.:..
  Fly   346 FYELLGGLSETERSKYGLLEADK-YFYLN----------QGATDCASGRVD-WESLQGAMQVLGV 398

  Fly   587 NHKQLETVRKVLAAILNIGNIRF-----RQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFI 646
            :..:.|.:.:||||:|::||:.|     |...:..||.:...:...|.||.:.......:||:  
  Fly   399 SEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTS-- 461

  Fly   647 MVKGGIAER--RQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIHDMF 709
            ......|||  .....::|.|||||.|..||:.|.:::::|||..:.  :....|.:.|.|.|:|
  Fly   462 RTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQ--KGGTHDAHRISILDIF 524

  Fly   710 GFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPD 774
            |||....|..|||.||..||.:|.::|:.:|..|..|...|.::...|.:.||...:..|..||.
  Fly   525 GFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPV 589

  Fly   775 GLFYIIDDASRSCQDQDL-IMDRVSEKH--SQFVKKHT--ATEISVAHYTGRIIYDTRAFTDINR 834
            |:.:::||.|...:..|| .:::....|  |:...:..  |.|..|.||.|::.|....|.|.||
  Fly   590 GICHLLDDESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNR 654

  Fly   835 DFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVN 899
            |.:..:::|           |:.:::|...|.||....|  .:|       |..||..|...:..
  Fly   655 DALRGDVLE-----------LLASSRLPLVGELTKQLRA--QRD-------AGKTLPKGSNGRFV 699

  Fly   900 NLR----TLAANFRFTCLTLLKMLSQNANLGVH--FVRCIRADLEYKPRSFHSDVVQQQMKALGV 958
            .::    |:||.|..:...||:.:.:     .|  |||||:.:.|..........|.||::.||:
  Fly   700 TMKPRTPTVAARFADSLQQLLQSMGR-----CHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGM 759

  Fly   959 LDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEM---TKDNCRLL---FLRLKMEG--WALG 1015
            |||:..||:|:..||.|..|:.||:.|   ...|:..   .::.||.|   ..|..:||  :.||
  Fly   760 LDTIQIRQRGYPVRLRFQHFVERYRHL---LPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLG 821

  Fly  1016 KTKVFLRYYNDEFLARLYE------LQVKKVIKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDV 1074
            .|:||||    |.|.|..|      |: :..:.||..:|.:|.|:::             .....
  Fly   822 ATRVFLR----EALHRALESGRTERLR-RAAVSVQRHVRGMLVRRQL-------------ARRQA 868

  Fly  1075 AASKIQKAFRGFR-----DRVRLPPLVNEK-------SGQLNENTADF-----IRPFAKKWRE-K 1121
            ||:::|..:||.|     :|:|...|..::       ..::.:..:|.     .|..|::.|| :
  Fly   869 AATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAREAR 933

  Fly  1122 SIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAG---------LNKCTRAVP------------- 1164
            ...|.:|......:.|..  ::...||::  :.|         |.|....||             
  Fly   934 EAKQAVLERSQLSYLDIP--AELAFIYSK--LQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDL 994

  Fly  1165 ----FERINMREVNSSQL----GPLPVPIKKMPFRLDQIPFYD---------------------- 1199
                |.:.:....|..:|    .|:..|:.......|| .|.|                      
  Fly   995 GQFSFGKFSSVYCNGLRLQPRREPITAPLLTRAASRDQ-DFQDALAVFKLILRWSNDKALEGAKE 1058

  Fly  1200 ---TQYMVDPANS-----------ISRQAF---PN--------QLLTQ----------------H 1223
               ..|:|..|.|           :..|..   ||        |||.|                .
  Fly  1059 KLLADYIVHKALSSRGLRDEILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMR 1123

  Fly  1224 MEDDEPWDS--PL-------QRNPSMTSCA-------------LTYNAYKK-----------EQA 1255
            ..|||..:|  ||       |:....:|.|             |.:.|:.:           ::|
  Fly  1124 FVDDEAPESLRPLLLRQLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDEA 1188

  Fly  1256 CQT----NWDRMGE-------SDNIYNQGY---FRDPQQLRRN---QMQMNMNAYNNAYNSYNSN 1303
            .||    :|....|       |..:.::|:   ..|.|||..:   ...|::.|......::.:.
  Fly  1189 SQTVAVDSWTSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCPAFPAP 1253

  Fly  1304 YNNQNWGVHRSGSR------RNSLKGYAAPPPPPPPMPSSNYYRNNPNQQ--------------Q 1348
            .::    :.|||::      .:::|..|.|||.|   |:|:...:.|.::              :
  Fly  1254 RSD----LLRSGAKFARTTLPDAVKRPAVPPPAP---PTSSGKEDVPRERRSSRELLSRSSALNE 1311

  Fly  1349 RNYQQRSSYPPSDPVRELQNMARNE-------GD--------NSEDPPFNFKAMLRKTNYPRGSE 1398
            |.:::..|..|.......|..:|::       ||        :|::|                  
  Fly  1312 RYFEREPSPGPGQGSSTGQAKSRSKSLDDLLAGDIVPVPTDCDSQEP------------------ 1358

  Fly  1399 TNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDE--GYNSSSGNYGV-SRKFGQQ-------- 1452
            .:|...:..|.:|.........|..:.||.|||..:  |..|.:.::|. |.|:..:        
  Fly  1359 LHTLGLSESRLNDRYHSAERLAPVGKDTGPRYQKSQHAGRRSHAASHGSHSSKYADKAEYATRSS 1423

  Fly  1453 -----QRAPTLRQ----------------------SPASVGRSFEDSNARSFE---EAGSYVEEE 1487
                 ..||:|..                      ||...|...|.|:|||..   ..|||.:|.
  Fly  1424 AMSDTSEAPSLASHVRRVRVPSQASDVDQFLDDLFSPVLDGSLDELSDARSLAASIRGGSYEQEN 1488

  Fly  1488 IAPG--ITLSGYAVDI 1501
            .|..  ..|..|..||
  Fly  1489 EAESEIDDLDDYINDI 1504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
S_TKc 16..282 CDD:214567
MYSc 327..1034 CDD:214580 209/732 (29%)
MYSc_Myo21 346..1022 CDD:276848 201/709 (28%)
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 209/732 (29%)
MYSc_Myo15 169..828 CDD:276838 201/709 (28%)
MyTH4 1014..1171 CDD:295320 27/157 (17%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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