DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Nrk

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_038955641.1 Gene:Nrk / 315907 RGDID:1566163 Length:1471 Species:Rattus norvegicus


Alignment Length:1628 Identity:313/1628 - (19%)
Similarity:503/1628 - (30%) Gaps:675/1628 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQH------------------------- 48
            |||||..|.:.:.|..|...:::..........||:|:.:                         
  Rat    18 LPDPTGIFSLEKTIGLGTYGRIYLGLHEKTGSFVAIKVMNARKTPLPEIGKRVRVNKYRKSVGWR 82

  Fly    49 YDEEHQVSIEEEYRT----LRDYCDHPNLPEFYGV-YKLSKPNGPDEIWFVMEYCAGGTAVDMVN 108
            |.:|     ||:.||    ||.|..|.|:..|||. :||:.|....::|.|||.||.|:..|:|.
  Rat    83 YSDE-----EEDLRTELNLLRKYSFHKNIVTFYGAFFKLNPPGHQHQLWMVMELCAAGSVTDVVR 142

  Fly   109 KLLKLDRRMREEHIAYIIRETCRAAIELNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDST 173
              :..::.::|:.||||.||..:....|:.:.|:||||:|.|:|||::..||:.|||:|.||..|
  Rat   143 --MTRNQSLKEDWIAYICREILQGLAHLHAHQVIHRDIKGQNVLLTQDAEVKIVDFGVSAQVSRT 205

  Fly   174 LGKRGTCIGSPCWMAPEVVSAMESREPDITVRADVWALGITTIELADGKPPFADMHPTRAMFQII 238
            .|:|.:.||:|.||||||:...|........|:|||::|||.||:|:|.||..::.|..|:|.|:
  Rat   206 NGRRNSFIGTPYWMAPEVIHCDEDPRRSYDYRSDVWSVGITAIEMAEGAPPLCNLQPLEALFVIL 270

  Fly   239 RNPPPTLMRPTNWSQQINDFISESLEKNAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELS 303
            |...|| ::.:.||::..:|:...:.||...||....|:.|||:.: |:||             .
  Rat   271 REAAPT-VKSSGWSRKFQNFMENCMIKNFLFRPTSGNMLHHPFVHD-IKNE-------------R 320

  Fly   304 RDVKTLYKEPELFVDRGYVKRFDEKPEKMYPEDLAALENPVDENIIESLRHRILMGESYSFIGDI 368
            |.|::|.|..     .|.:::.:.|                              |...:|.|  
  Rat   321 RVVESLTKHL-----TGIIQKRERK------------------------------GIPLAFEG-- 348

  Fly   369 LLSLNSNEIKQEFPQEFHAKYRFKSRSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKST 433
                      :|...|.:...||:                                     |.|.
  Rat   349 ----------EEAVNEQYITRRFR-------------------------------------GPSC 366

  Fly   434 NARLLIKHLCYLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAV 498
            ...||                ||.:                  |:||                  
  Rat   367 TPELL----------------RVPT------------------SSRC------------------ 379

  Fly   499 FNMYMLEKLRVATTDGTQHNFHIFYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYR 563
                  ..|||...:..|..:                               :|.|..|      
  Rat   380 ------RPLRVLHGEPPQPRW-------------------------------LPDEEQP------ 401

  Fly   564 RDDPEGNVERYREFENILRDIDFNHKQLETVRK-------------VLAAILNIGNIRFRQNGKY 615
             :|.|  :::.:|...:...:....|.|:.::|             ||..:              
  Rat   402 -EDQE--LQQLQEAARMFMPLHSQDKTLKPLQKQAQLPQHLHVAPQVLMPV-------------- 449

  Fly   616 AEVENTDIVSRIAELLRVDEK--KFMWSLTNFIMVKGGIAERRQYTTEEARDARDAVASTLYSRL 678
             :||.| :.:.:|:.:|...:  |..|.||                   :..::|..||:     
  Rat   450 -QVEAT-VATPLAKKIRAPPQLSKAAWGLT-------------------SPPSQDNKASS----- 488

  Fly   679 VDFIINRINMNMSFPRAVFGDTNAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISE 743
                   ..:....||                                 .:|.|         ::
  Rat   489 -------PEVQAPIPR---------------------------------EQQAQ---------ND 504

  Fly   744 MLEME-AEDIDTINLNFYDNKTALDNLLTKPDGLFYIIDDASRSCQDQDLIMDRVSEKHSQFVKK 807
            .||.| .||:|.:...|.....|.:             :.......:|:...:.|.|:|      
  Rat   505 ALETEQPEDLDQVPEEFQGQDRAAE-------------EQRQGQAAEQEQRQNGVPEQH------ 550

  Fly   808 HTATEISVAHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFE 872
                                  .:.||:   ||..|....:::.                  |..
  Rat   551 ----------------------PEENRE---PEQAEVQEEAVEP------------------PQA 572

  Fly   873 AVQHKDESERKSYALNTLSAGCISQVNNLRTLAANFRFTCLTLLKMLSQN------ANLGVHFVR 931
            .|:.||..              :.||:            ....|.:.|||      .:|....:.
  Rat   573 EVEEKDPE--------------VIQVH------------ARVFLPLQSQNHHVFLPLHLDTQLLI 611

  Fly   932 CIRADLEYKPRSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEMT 996
            .:....|..||:...|:  :..:|.|.:..::   :|.|.     :.||          .|...|
  Rat   612 PVGEQNEEAPRAQAWDL--EASRAAGAVQALV---EGLSR-----DLLR----------APNAFT 656

  Fly   997 KDNCRLLFLRLKMEGWALGKTKVFLR------YYNDEFLARLYELQVKKVIKVQSMMRALLAR-- 1053
            ..              .||..::.|.      :|.:.      |...||..:|.|:.:|::.|  
  Rat   657 SK--------------PLGPLQILLESLCTNGFYTEP------EAVQKKKSRVSSLKKAIVKRLT 701

  Fly  1054 -KRVKGGKVFKLGKKGPEHHDVAASKIQKAFRGFRDRVRLPPLVNEKSGQLNENTADFIRPFAKK 1117
             ||.:...:::       ..|...|.::.:.|  |.:.|...:.|:...||.|...|      :.
  Rat   702 PKRFRAKALWR-------RQDFECSDVESSRR--RRQRRWEEIFNQHEEQLREVEND------RD 751

  Fly  1118 WREKSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPFERINMREVNSSQLGPLP 1182
            ..:.|....:.|        .:....|:..|...                   |..|..|....|
  Rat   752 DDDSSDNDEVFH--------SIQAEVQIEPYAPN-------------------RTGNEVQERSAP 789

  Fly  1183 VP--------IKKMPFRLDQIPFYDTQYMVD--PANSISRQAFPNQLLTQHMEDDEPWDSPLQRN 1237
            :|        :|..|...:|....:.|..:|  |.||::.:.|..:     .|.....|||:.|.
  Rat   790 MPCNRNRTHRVKFSPSVCEQALLEEAQQPMDIRPRNSLNPRNFQAE-----SESSSEEDSPVTRR 849

  Fly  1238 PSMTS----------------------------CALTYNAYKKEQACQTNWD---------RMGE 1265
            .|.:|                            ..||..........:..||         |..|
  Rat   850 KSQSSPPYSTIDQRLLIDIHVPDGFKVGKISPPVYLTNEWVGCNPLSEVFWDDWVNPTPATRRHE 914

  Fly  1266 SDNIYNQGYFRDPQQLRRNQMQMNMNAYNNAY-NSYNSNYNNQNWGVHRSGSRRNSLKGYAAPPP 1329
            .|..|.:.|..|.....|        |.|.|| .:|.|.:::.|   |:                
  Rat   915 EDGDYVELYDADANGDGR--------ASNYAYEENYASGHDDMN---HQ---------------- 952

  Fly  1330 PPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEGDNSEDPPFNFKAMLRKTNYP 1394
                   :|.||.:.|   |:|...|              .||.|| |....||..    :.:|.
  Rat   953 -------ANGYRGHGN---RHYSDGS--------------FRNRGD-SRGAAFNGP----RASYC 988

  Fly  1395 RGSETNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDEGYNSSSGNYGVSRKFGQQQ------ 1453
            ||.      .....|:|..|..       |...|.|.|:|..|......|.|..||.|:      
  Rat   989 RGG------ILKNAGNDGRDLR-------RGAFRAYGDNEASNYHGAASGASAAFGSQEGHEGHM 1040

  Fly  1454 ---RAPTLRQSPASVGRS-----------------FED-SNARSFEEAGSYVEEEIAPGITLSGY 1497
               |....|:...|.|.:                 |.| .|.:...:||:...:.||  :.::.:
  Rat  1041 GGRRGNRYREVNGSSGENGACGFHRDGAGLDQQHVFPDFENEQEQSDAGTETSDSIA--LEITSF 1103

  Fly  1498 AVD 1500
            ::|
  Rat  1104 SLD 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 106/302 (35%)
S_TKc 16..282 CDD:214567 101/295 (34%)
MYSc 327..1034 CDD:214580 92/734 (13%)
MYSc_Myo21 346..1022 CDD:276848 89/697 (13%)
NrkXP_038955641.1 PKc_like 18..313 CDD:419665 106/302 (35%)
CNH 1158..1438 CDD:395630
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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