DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and Map4k4

DIOPT Version :9

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_008765222.2 Gene:Map4k4 / 301363 RGDID:1305322 Length:1390 Species:Rattus norvegicus


Alignment Length:373 Identity:131/373 - (35%)
Similarity:207/373 - (55%) Gaps:29/373 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AQLPDPTDKFEIYEEIAQGVNAKVFRAKELDNDRIVALKIQHYDEEHQVSIEEEYRTLRDYCDHP 71
            :.|.||...||:.|.:..|...:|::.:.:...::.|:|:....|:.:..|:.|...|:.|..|.
  Rat    16 SSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHR 80

  Fly    72 NLPEFYGVY-KLSKPNGPDEIWFVMEYCAGGTAVDMVNKLLKLDRRMREEHIAYIIRETCRAAIE 135
            |:..:||.: |.|.|...|::|.|||:|..|:..|:|..  .....::|:.||||.||..|....
  Rat    81 NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKN--TKGNTLKEDWIAYISREILRGLAH 143

  Fly   136 LNRNHVLHRDIRGDNILLTKNGRVKLCDFGLSRQVDSTLGKRGTCIGSPCWMAPEVVSAMESREP 200
            |:.:||:||||:|.|:|||:|..|||.|||:|.|:|.|:|:|.|.||:|.||||||::..|:.:.
  Rat   144 LHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 208

  Fly   201 DITVRADVWALGITTIELADGKPPFADMHPTRAMFQIIRNPPPTLMRPTNWSQQINDFISESLEK 265
            ....|:|:|:.|||.||:|:|.||..||||.||:|.|.|||||.| :...||::...||...|.|
  Rat   209 TYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRL-KSKKWSKKFFSFIEGCLVK 272

  Fly   266 NAENRPMMVEMVEHPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRGYVKRFDEKPE 330
            |...||...::::|||:.:. .||.::|..:.:.::.:|..:....|.|      |.....|:.|
  Rat   273 NYMQRPSTEQLLKHPFIRDQ-PNERQVRIQLKDHIDRTRKKRGEKDETE------YEYSGSEEEE 330

  Fly   331 KMYPE---DLAALENPVDENII---------------ESLRHRILMGE 360
            :..||   :.:::.|...|:.:               |:||.:.|:.|
  Rat   331 EEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785 112/273 (41%)
S_TKc 16..282 CDD:214567 109/266 (41%)
MYSc 327..1034 CDD:214580 11/52 (21%)
MYSc_Myo21 346..1022 CDD:276848 6/30 (20%)
Map4k4XP_008765222.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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