DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaC and MYO1H

DIOPT Version :10

Sequence 1:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens


Alignment Length:1099 Identity:260/1099 - (23%)
Similarity:455/1099 - (41%) Gaps:246/1099 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 EKMYPEDLAALENPVDEN-IIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQEFHAKYRFKS 393
            :|:..:|...|:....|: .:::||.|......|::||.:|:|:|..:....:.......|:..:
Human     9 DKVGVQDFVLLDAYTSESAFVDNLRKRFSENLIYTYIGTLLVSVNPYQELGIYTVSQMELYQGVN 73

  Fly   394 RSENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHL---CYLGDGNRGATGR 455
            ..|..||::::||.||:.|........|::||||.:||:..::.::::.   |.:....:.|..|
Human    74 FFELPPHVYAIADNAYRMMCAELNNHFILISGESGAGKTEASKKILEYFAVTCPMTQSLQIARDR 138

  Fly   456 VESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFH 520
            :..|...:....||.|..|::|:|......:.|...|...|.....|::||.||...:..:.|||
Human   139 LLFSNPVLEAFGNARTLRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVYQNEGERNFH 203

  Fly   521 IFYYFYDFINQQNQLKEYNLKAD-RNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDI 584
            |||..... .::.:|....|:.| :.|:||........|.:..:.|        ::...|....|
Human   204 IFYQLLAG-GEEERLSYLGLERDPQLYKYLSQGHCAKESSISDKND--------WKTVSNAFSVI 259

  Fly   585 DFNHKQLETVRKVLAAILNIGNIRFRQNGK-YAEVENTDIVSRIAELLRVDEKKFMWSLTNFIMV 648
            ||....||.:..::|::|::|||.|.::.: .|.:.:|..:..||:||.|.....:.:||:    
Human   260 DFTEADLENLFGIIASVLHLGNIGFEEDDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTH---- 320

  Fly   649 KGGIAERRQYTTEE---------ARDARDAVASTLYSRLVDFIINRIN---MNMSFPR-AVFGDT 700
                 .:.:..|||         :..||||:|..:|.|...:::|:||   :|..|.| .|.|  
Human   321 -----RKIEAKTEEVICPLTLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIG-- 378

  Fly   701 NAIIIHDMFGFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTA 765
                :.|::|||.|::||.||..||..||::|....:|...:|..|.|.|.|:...:.:::||..
Human   379 ----LLDIYGFEVFDKNGFEQFCINYCNEKLQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKII 439

  Fly   766 LDNLLTKPDGLFYIID-DASRSCQDQDL-IMDRVSE---KHSQFVKKHTA----------TEISV 815
            .|.:..:..|:..|:| :..|.....|| .::::.|   ||:.|..:..|          .|..:
Human   440 CDLVEERHKGIISILDEECIRPGPATDLSFLEKLEEKVGKHAHFETRKLAGPKGRKRIGWMEFRL 504

  Fly   816 AHYTGRIIYDTRAFTDINRDFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDES 880
            .||.|.:.|.|:.|.:.|.|.:...:.|.                |.|:.|:.:           
Human   505 LHYAGEVTYCTKGFLEKNNDLLYRHLKEV----------------LCKSKNIIL----------- 542

  Fly   881 ERKSYALNTLSAGCISQVNNLR---TLAANFRFTCLTLLK-MLSQNANLGVHFVRCIRADLEYKP 941
             |:.:.|        :::.|.|   |:...|:.:..:||: ::|:..:    ::|||:.:...:|
Human   543 -RECFLL--------AELENRRRPPTVGTQFKNSLSSLLETLISKEPS----YIRCIKPNDRKEP 594

  Fly   942 RSFHSDVVQQQMKALGVLDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVE------MTKDNC 1000
            ..|...:::.|:|.||:::.:..|:.||:.|..::.||:||  |..:....||      ..||..
Human   595 SKFDDFLIRHQIKYLGLMEHLRVRRAGFAYRRKYEHFLQRY--LGVELSHWVERLMMSLFYKDRY 657

  Fly  1001 RLL---------------------FLRLKMEGWALGKTKVFLRY------YNDEF-------LAR 1031
            :.|                     ::..|.|.:.|||||:|:|:      ..|.|       :||
Human   658 KSLCPDTWPHWHGPPAEGVERLIKYIGYKPEEYKLGKTKIFIRFPRTLFATEDAFEFSKHQLVAR 722

  Fly  1032 L------------YELQVKKVIKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDVAASKIQKAFR 1084
            :            |..:.:..||:::..|..||||.::..|             .|...|:|..:
Human   723 IQATYKRCLGRREYVKKRQAAIKLEAHWRGALARKAIQRRK-------------WAVRIIRKFIK 774

  Fly  1085 GFRDR--------------VR----------LPPLVNEKS-----GQLNENTADFIRPFAKKWRE 1120
            ||..|              ||          ||..|.:||     |.| ||.:|.:|....:...
Human   775 GFISRNKPLCPDNEEFIVFVRKNYILNLRYHLPKTVLDKSWLRPPGIL-ENASDLLRKMCVRNLV 838

  Fly  1121 KSIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAGLNKCTRAVPF--ERINMREVNSSQLGPLP- 1182
            :...:.:...|.|..|..|..|:............||:     ||  .||:..::|...|..:. 
Human   839 QKYCRGITAERKAMMQQKVVTSEIFRGRKDGYTESLNQ-----PFVNSRIDEGDINPKVLQLISH 898

  Fly  1183 ------VPIKKMP---FRLDQIPFYDTQ---YMVDPA-----------NSISRQAFPNQLLTQHM 1224
                  ||:.|..   |:..|.....||   |:|:.|           ..:|.....:.:|..|:
Human   899 EKIQYGVPVIKYDRKGFKARQRQLILTQKAAYVVELAKIKQKIEYSALKGVSTSNLSDGILVIHV 963

  Fly  1225 EDDEPWDSPLQRNPSMTSCALTYNAYKKEQACQTNWDRMGESDNIYN--QG---YFRDP 1278
               .|.||. |:..::..|...:.|.       |....:.:.:||.|  ||   :|..|
Human   964 ---SPEDSK-QKGDAVLQCGHVFEAV-------TKLVMLVKKENIVNVVQGSLQFFISP 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
MYSc_Myo21 346..1022 CDD:276848 184/740 (25%)
MYO1HXP_011536525.1 MYSc_Myo1 26..700 CDD:276829 183/739 (25%)
Adgb_C_mid-like <696..>763 CDD:412094 15/66 (23%)
globin helix H 696..720 CDD:412094 5/23 (22%)
IQ motif 744..762 CDD:412094 7/17 (41%)
Myosin_TH1 856..1037 CDD:461801 37/172 (22%)
Blue background indicates that the domain is not in the aligned region.

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